RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RNPS1Q15287 305 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 THEM4Q5T1C6 240 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 B3GLCTQ6Y288 498 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 KCTD8Q6ZWB6 473 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 AAED1Q7RTV5 226 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 PRSS48Q7RTY5 328 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 OR51G2Q8NGK0 314 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 OR52I1Q8NGK6 324 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 OR6K6Q8NGW6 343 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 OR6N1Q8NGY5 312 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 FNDC9Q8TBE3 224 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 ZMYND19Q96E35 227 aaPredicted RBP11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 POM121Q96HA1 1249 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 TSSK2Q96PF2 358 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF385AQ96PM9 386 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 KCNK17Q96T54 332 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 RHNO1Q9BSD3 238 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 NUAK2Q9H093 628 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 HAO2Q9NYQ3 351 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 EMC3Q9P0I2 261 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 EXOGQ9Y2C4 368 aaKnown RBP11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 FLVCR1Q9Y5Y0 555 aa11.6□□□□□ -0.55
SHKBP1-209ENST00000595803 ESPL1Q14674 2120 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 SLC22A20A6NK97 555 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 NR2C1P13056 603 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 PRF1P14222 555 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 DCKP27707 260 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 C21orf33P30042 268 aaPredicted RBP11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 PTGS2P35354 604 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 BLMHQ13867 455 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 SHFQ7M4L6 423 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 ZBTB46Q86UZ6 589 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 ZIC4Q8N9L1 334 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 Q8NA96 180 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 OR4F15Q8NGB8 312 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 OR5M9Q8NGP3 310 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 CPT1CQ8TCG5 803 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 RNF128Q8TEB7 428 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 ABHD3Q8WU67 409 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 FAR1Q8WVX9 515 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNRF4Q8WWF5 429 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 TRIB1Q96RU8 372 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 MRPL13Q9BYD1 178 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 RNF122Q9H9V4 155 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 PARPBPQ9NWS1 579 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 NOSIPQ9Y314 301 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 EXOSC1Q9Y3B2 195 aaKnown RBP11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 ZNF175Q9Y473 711 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 COMMD3-BMI1R4GMX3 469 aa11.59□□□□□ -0.55
SHKBP1-209ENST00000595803 IGKV3D-15A0A087WSY6 115 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 TRIM64CA6NLI5 447 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF724A8MTY0 619 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 SLC43A1O75387 559 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 MRPL33O75394 65 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 AQP8O94778 261 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 APOL3O95236 402 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 HLA-DQA2P01906 255 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 YES1P07947 543 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 HTR1AP08908 422 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 SBK2P0C263 348 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 PGA4P0DJD7 388 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 PGA3P0DJD8 388 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 FCGR2AP12318 317 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 MYL12AP19105 171 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 MAP2K4P45985 399 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 RPL5P46777 297 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 CSNK1A1P48729 337 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 NR1H2P55055 460 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 MVKQ03426 396 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 DBPQ10586 325 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF324BQ6AW86 544 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF585AQ6P3V2 769 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 PLXDC2Q6UX71 529 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 WDFY1Q8IWB7 410 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 TUSC5Q8IXB3 177 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 NOXO1Q8NFA2 376 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 NSMAFQ92636 917 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 KISS1RQ969F8 398 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 TMEM54Q969K7 222 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 OR2M2Q96R28 347 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 CDCA4Q9BXL8 241 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 CALHM2Q9HA72 323 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 GLTPQ9NZD2 209 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 DIMT1Q9UNQ2 313 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 RCE1Q9Y256 329 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 ERGIC3Q9Y282 383 aa11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 COA3Q9Y2R0 106 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-209ENST00000595803 DAPL1A0PJW8 107 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 TVP23AA6NH52 213 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 TTLL8A6PVC2 850 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 DCTN6O00399 190 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 ZNF432O94892 652 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 TGM6O95932 706 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 TPOP07202 933 aa11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 MRPL3P09001 348 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-209ENST00000595803 QDPRP09417 244 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms