RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NR0B2Q15466 257 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 NNATQ16517 81 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 ZNF574Q6ZN55 896 aaPredicted RBP13.97□□□□□ -0.17
PNKP-204ENST00000594661 WDSUB1Q8N9V3 476 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 THAP6Q8TBB0 222 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 ZNF501Q96CX3 271 aaPredicted RBP13.97□□□□□ -0.17
PNKP-204ENST00000594661 RNFT2Q96EX2 444 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 PTCHD1Q96NR3 888 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 TEX12Q9BXU0 123 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 KRCC1Q9NPI7 259 aaPredicted RBP13.97□□□□□ -0.17
PNKP-204ENST00000594661 TREM2Q9NZC2 230 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 A0A1B0GVC2 190 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 CDHR4A6H8M9 788 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 A6NIN4 97 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 PATE3B3GLJ2 98 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 KLF4O43474 513 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 GATBO75879 557 aaKnown RBP13.97□□□□□ -0.17
PNKP-204ENST00000594661 CLPSP04118 112 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 CD79BP40259 229 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 EFNA3P52797 238 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 FUT7Q11130 342 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 INSL4Q14641 139 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 MELKQ14680 651 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 ZNHIT3Q15649 155 aaPredicted RBP13.97□□□□□ -0.17
PNKP-204ENST00000594661 ELFN2Q5R3F8 820 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 ZNF620Q6ZNG0 422 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 TPRA1Q86W33 373 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 KMT5CQ86Y97 462 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 POGLUT1Q8NBL1 392 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 OR4Q3Q8NH05 313 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 C16orf52Q8NHV5 167 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 TSLPQ969D9 159 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 ARSGQ96EG1 525 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 MVB12AQ96EY5 273 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 WDR89Q96FK6 387 aaPredicted RBP13.97□□□□□ -0.17
PNKP-204ENST00000594661 OR10A5Q9H207 317 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 FGF21Q9NSA1 209 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
PNKP-204ENST00000594661 IL20RAQ9UHF4 553 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 FLVCR2Q9UPI3 526 aa13.97□□□□□ -0.17
PNKP-204ENST00000594661 LRRN3E7EW58 273 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 CDC42EP2O14613 210 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 EIF4E2O60573 245 aaKnown RBP13.96□□□□□ -0.17
PNKP-204ENST00000594661 ADCYAP1P18509 176 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 PSMB1P20618 241 aaKnown RBP13.96□□□□□ -0.17
PNKP-204ENST00000594661 SDHBP21912 280 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 DEFA6Q01524 100 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 OR1Q1Q15612 314 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 ANKRD39Q53RE8 183 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 C1orf189Q5VU69 101 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 RHOUQ7L0Q8 258 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 FAM122BQ7Z309 247 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 KLHL36Q8N4N3 616 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 ZNF615Q8N8J6 731 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 PRSS27Q9BQR3 290 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 NDC1Q9BTX1 674 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 ALX4Q9H161 411 aaPredicted RBP13.96□□□□□ -0.17
PNKP-204ENST00000594661 LRRN3Q9H3W5 708 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 OPN4Q9UHM6 478 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 ZDBF2Q9HCK1 2354 aa13.96□□□□□ -0.17
PNKP-204ENST00000594661 LOC390937A0A1W2PQ73 354 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 A0A1W2PQM1 296 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 SNRPGP15A8MWD9 76 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 KDM4EB2RXH2 506 aaPredicted RBP13.96□□□□□ -0.18
PNKP-204ENST00000594661 SPDEFO95238 335 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 CT45A8P0DMV1 189 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 CT45A9P0DMV2 189 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 RPA2P15927 270 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 PNLIPP16233 465 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 MTNR1AP48039 350 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 SMCO1Q147U7 214 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 PGGHGQ32M88 737 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 CDNFQ49AH0 187 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 CT45A2Q5DJT8 189 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 PEAR1Q5VY43 1037 aaPredicted RBP13.96□□□□□ -0.18
PNKP-204ENST00000594661 ZNF626Q68DY1 528 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 TMEM71Q6P5X7 295 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 KRT77Q7Z794 578 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 ZNF614Q8N883 585 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 RCBTB1Q8NDN9 531 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 PFDN5Q99471 154 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 WDR77Q9BQA1 342 aaPredicted RBP13.96□□□□□ -0.18
PNKP-204ENST00000594661 UTP23Q9BRU9 249 aaKnown RBP13.96□□□□□ -0.18
PNKP-204ENST00000594661 TCF7L1Q9HCS4 588 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 NKIRAS2Q9NYR9 191 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 SERTAD3Q9UJW9 196 aa13.96□□□□□ -0.18
PNKP-204ENST00000594661 C17orf105B2RV13 164 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 CTDSPLO15194 276 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 SURF4O15260 269 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 RGS9O75916 674 aaPredicted RBP13.95□□□□□ -0.18
PNKP-204ENST00000594661 IL5P05113 134 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 FBLP22087 321 aaKnown RBP13.95□□□□□ -0.18
PNKP-204ENST00000594661 RAD52P43351 418 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 CCL7P80098 99 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 PDZK1IP1Q13113 114 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 WDR88Q6ZMY6 472 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 MISPQ8IVT2 679 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 SLC43A2Q8N370 569 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 MEIOBQ8N635 442 aa13.95□□□□□ -0.18
PNKP-204ENST00000594661 EID2Q8N6I1 236 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms