RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TFP02787 698 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 PSMA1P25786 263 aaKnown RBP13.51□□□□□ -0.25
VRK3-207ENST00000594092 NAA10P41227 235 aaPredicted RBP13.51□□□□□ -0.25
VRK3-207ENST00000594092 CLDN17P56750 224 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 ACSM1Q08AH1 577 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 CAMK2DQ13557 499 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 ABLIM2Q6H8Q1 611 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 PHC2Q8IXK0 858 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 SLC35F2Q8IXU6 374 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 NDNFQ8TB73 568 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 ZNF385AQ96PM9 386 aaKnown RBP13.51□□□□□ -0.25
VRK3-207ENST00000594092 TAAR6Q96RI8 345 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 TIMP4Q99727 224 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 CHCHD6Q9BRQ6 235 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 A0A1W2PQL4 384 aaPredicted RBP13.5□□□□□ -0.25
VRK3-207ENST00000594092 ZNF726A6NNF4 738 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 ZNF716A6NP11 495 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 TAF4O00268 1085 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 GPANK1O95872 356 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 IGHG1P01857 330 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 C1QTNF9P0C862 333 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 PGA4P0DJD7 388 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 PGA3P0DJD8 388 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 CRABP1P29762 137 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 CAPZA2P47755 286 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 RPS3AP61247 264 aaKnown RBP13.5□□□□□ -0.25
VRK3-207ENST00000594092 FMODQ06828 376 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 TPBGQ13641 420 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 ETFDHQ16134 617 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 C3AR1Q16581 482 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 FCRLAQ7L513 359 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 ZIC4Q8N9L1 334 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 NOXO1Q8NFA2 376 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 SNRNP27Q8WVK2 155 aaKnown RBP13.5□□□□□ -0.25
VRK3-207ENST00000594092 ADAD1Q96M93 576 aaKnown RBP13.5□□□□□ -0.25
VRK3-207ENST00000594092 IGKV1D-43A0A0B4J1Z2 117 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 TVP23AA6NH52 213 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 CYTIPO60759 359 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 WISP2O76076 250 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 MT-ND5P03915 603 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 HCCSP53701 268 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 CLRN1P58418 232 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 BDH1Q02338 343 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 ZNF85Q03923 595 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 USP43Q70EL4 1123 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 TIGD4Q8IY51 512 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 MRPL48Q96GC5 212 aaKnown RBP13.5□□□□□ -0.25
VRK3-207ENST00000594092 WDYHV1Q96HA8 205 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 MARCH7Q9H992 704 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 ISG20L2Q9H9L3 353 aaKnown RBP13.5□□□□□ -0.25
VRK3-207ENST00000594092 PAQR5Q9NXK6 330 aaPredicted RBP13.5□□□□□ -0.25
VRK3-207ENST00000594092 STUB1Q9UNE7 303 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 B3GNT3Q9Y2A9 372 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 TP53TG5Q9Y2B4 290 aa13.5□□□□□ -0.25
VRK3-207ENST00000594092 A0A087WV48 116 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 CPN1P15169 458 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 UGT2B10P36537 528 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 ACTA2P62736 377 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 ACTG2P63267 376 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 CXADRP78310 365 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 CARD17Q5XLA6 110 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 GDPGP1Q6ZNW5 385 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 KLBQ86Z14 1044 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 SIAH3Q8IW03 269 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 KBTBD8Q8NFY9 601 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 FOXN4Q96NZ1 517 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 RBP7Q96R05 134 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 OR2M2Q96R28 347 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 TRIM36Q9NQ86 728 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 BABAM2Q9NXR7 383 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 COA3Q9Y2R0 106 aaPredicted RBP13.49□□□□□ -0.25
VRK3-207ENST00000594092 FLVCR1Q9Y5Y0 555 aa13.49□□□□□ -0.25
VRK3-207ENST00000594092 PNMA8CA0A1B0GUJ8 204 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 A0A1B0GVC2 190 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 ZNF432O94892 652 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 SYNGR4O95473 234 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 LALBAP00709 142 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 TGFBR1P36897 503 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 CENPAP49450 140 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 HSF2Q03933 536 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 RASGEF1BQ0VAM2 473 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 HIST3H3Q16695 136 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 PLEKHN1Q494U1 663 aaPredicted RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 THEM4Q5T1C6 240 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 RPUSD3Q6P087 351 aaKnown RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 DNM1P34Q6PK57 102 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 SSX6Q7RTT6 188 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 SLC16A9Q7RTY1 509 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 TMEM123Q8N131 208 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 RFLNBQ8N5W9 214 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 ZNF775Q96BV0 537 aaPredicted RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 CENPOQ9BU64 300 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 DCSTAMPQ9H295 470 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 WDR76Q9H967 626 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 EXOSC4Q9NPD3 245 aaKnown RBP13.48□□□□□ -0.25
VRK3-207ENST00000594092 SSR3Q9UNL2 185 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 COPS3Q9UNS2 423 aa13.48□□□□□ -0.25
VRK3-207ENST00000594092 CENPBD1B2RD01 187 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms