RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 CCNOP22674 350 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 APLNRP35414 380 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 GP2P55259 537 aaKnown RBP9.55□□□□□ -0.88
ZNF558-202ENST00000593891 FAM153CQ494X1 144 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 CDONQ4KMG0 1287 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 TTC27Q6P3X3 843 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 KLC3Q6P597 504 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 METAP1DQ6UB28 335 aaPredicted RBP9.55□□□□□ -0.88
ZNF558-202ENST00000593891 OVCH2Q7RTZ1 564 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 CMC1Q7Z7K0 106 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 IGFN1Q86VF2 1251 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 C1orf87Q8N0U7 546 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 OR51G2Q8NGK0 314 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 LRR1Q96L50 414 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 MECRQ9BV79 373 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 ULBP2Q9BZM5 246 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 PRSS22Q9GZN4 317 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 RMND5AQ9H871 391 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 EXOSC3Q9NQT5 275 aaKnown RBP9.55□□□□□ -0.88
ZNF558-202ENST00000593891 KPTNQ9Y664 436 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 TEX264Q9Y6I9 313 aa9.55□□□□□ -0.88
ZNF558-202ENST00000593891 TRBV23-1A0A0A0MS06 115 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 SYNGR1O43759 233 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 CHST1O43916 411 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 OR4F21O95013 312 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 SAA4P35542 130 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 PSMB10P40306 273 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 TP53BP2Q13625 1128 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 LRRC75BQ2VPJ9 315 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 KHDC1LQ5JSQ8 128 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 DPPA2Q7Z7J5 298 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 LSRQ86X29 649 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-202ENST00000593891 ANKMY2Q8IV38 441 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 HIPK4Q8NE63 616 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 OR6N1Q8NGY5 312 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 ZNF420Q8TAQ5 688 aaPredicted RBP9.54□□□□□ -0.88
ZNF558-202ENST00000593891 CDKL2Q92772 493 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 MYDGFQ969H8 173 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 MAGOHBQ96A72 148 aaKnown RBP9.54□□□□□ -0.88
ZNF558-202ENST00000593891 OR2V2Q96R30 315 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 CPNE1Q99829 537 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 SIRT7Q9NRC8 400 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 MKLN1Q9UL63 735 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 CAPN6Q9Y6Q1 641 aa9.54□□□□□ -0.88
ZNF558-202ENST00000593891 MUC4Q99102 2169 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 A8MVM7 634 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 H3BSA7 217 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 STX16-NPEPL1H3BU86 382 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 STX16O14662 325 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 FCMRO60667 390 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 BCAS1O75363 584 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 FARS2O95363 451 aaKnown RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 AK1P00568 194 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 TFPTP0C1Z6 253 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 PNMTP11086 282 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 UQCRBP14927 111 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 AHCYP23526 432 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 MAPK1P28482 360 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 HMOX2P30519 316 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 SPRP35270 261 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 VDAC2P45880 294 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 ETF1P62495 437 aaKnown RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 NFYCQ13952 458 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 CHI3L2Q15782 390 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 C1orf140Q5VVS0 124 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 ANKRD26P1Q6NSI1 321 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 CENPVQ7Z7K6 275 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 MIER2Q8N344 545 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 SLC22A24Q8N4F4 322 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 PNPT1Q8TCS8 783 aaKnown RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 OIT3Q8WWZ8 545 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 PPCDCQ96CD2 204 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 SLC25A36Q96CQ1 311 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 TUBGCP3Q96CW5 907 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 PTDSS2Q9BVG9 487 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 MAN2C1Q9NTJ4 1040 aa9.53□□□□□ -0.88
ZNF558-202ENST00000593891 ZNF256Q9Y2P7 627 aaPredicted RBP9.53□□□□□ -0.88
ZNF558-202ENST00000593891 AP3D1O14617 1153 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 FRMD6-AS1P0C7T7 363 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 PAICSP22234 425 aaKnown RBP9.52□□□□□ -0.89
ZNF558-202ENST00000593891 AANATQ16613 207 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 GSTA3Q16772 222 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 SLC36A2Q495M3 483 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 FAM219BQ5XKK7 198 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 AP1ARQ63HQ0 302 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 CENPLQ8N0S6 344 aaPredicted RBP9.52□□□□□ -0.89
ZNF558-202ENST00000593891 OR56A1Q8NGH5 318 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 FAM76AQ8TAV0 307 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 METTL6Q8TCB7 284 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 SH3GL3Q99963 347 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 ZNF649Q9BS31 505 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 CDCA4Q9BXL8 241 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 MMADHCQ9H3L0 296 aaPredicted RBP9.52□□□□□ -0.89
ZNF558-202ENST00000593891 SH3BP4Q9P0V3 963 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 TMCO1Q9UM00 188 aa9.52□□□□□ -0.89
ZNF558-202ENST00000593891 POLR3HQ9Y535 204 aaPredicted RBP9.52□□□□□ -0.89
ZNF558-202ENST00000593891 DNAH10Q8IVF4 4471 aa9.51□□□□□ -0.89
ZNF558-202ENST00000593891 DNALI1O14645 258 aaPredicted RBP9.51□□□□□ -0.89
ZNF558-202ENST00000593891 AHSA1O95433 338 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms