RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 THEM4Q5T1C6 240 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 SMARCD3Q6STE5 483 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 B3GLCTQ6Y288 498 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 DPY19L2P2Q6ZN68 376 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 HDDC2Q7Z4H3 204 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 MDP1Q86V88 176 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 SPATA24Q86W54 205 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 SLC22A24Q8N4F4 322 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 RADILQ96JH8 1075 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 SLC38A2Q96QD8 506 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 CXXC4Q9H2H0 198 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 SMURF2Q9HAU4 748 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 ITGB1BP2Q9UKP3 347 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 MGAT4BQ9UQ53 548 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 SAMHD1Q9Y3Z3 626 aaKnown RBP13.32□□□□□ -0.28
TRIM47-206ENST00000592942 IER3IP1Q9Y5U9 82 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 C2CD3Q4AC94 2353 aa13.32□□□□□ -0.28
TRIM47-206ENST00000592942 SLC22A23A1A5C7 686 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 A6NIZ1 184 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 ARHGEF9O43307 516 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 TXNDC12O95881 172 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 CST1P01037 141 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 CD8AP01732 235 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 TP53P04637 393 aaPredicted RBP13.31□□□□□ -0.28
TRIM47-206ENST00000592942 SOD3P08294 240 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 CECR9P0C854 216 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 CDAP32320 146 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 IFNGR2P38484 337 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 RAP1BP61224 184 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 RAP1AP62834 184 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 PIGFQ07326 219 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 KEAP1Q14145 624 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 ETFDHQ16134 617 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 FAM205BPQ63HN1 556 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 C20orf204Q6ZNR8 217 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
TRIM47-206ENST00000592942 LINC00471Q8N535 108 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 NABP1Q96AH0 204 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 RASD2Q96D21 266 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 FOXC2Q99958 501 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 SH3GL3Q99963 347 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 OR52D1Q9H346 318 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 REEP1Q9H902 201 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 NTN4Q9HB63 628 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 KRCC1Q9NPI7 259 aaPredicted RBP13.31□□□□□ -0.28
TRIM47-206ENST00000592942 CISD1Q9NZ45 108 aaKnown RBP13.31□□□□□ -0.28
TRIM47-206ENST00000592942 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 MOKQ9UQ07 419 aa13.31□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF469Q96JG9 3925 aaPredicted RBP13.31□□□□□ -0.28
TRIM47-206ENST00000592942 ZFHX3Q15911 3703 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 PRSS37A4D1T9 235 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 H7C1C5 153 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 FKBP6O75344 327 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 CCNB2O95067 398 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 SCG5P05408 212 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 OR8G3PP0DMU2 310 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 APEHP13798 732 aaKnown RBP13.3□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF14P17017 642 aaPredicted RBP13.3□□□□□ -0.28
TRIM47-206ENST00000592942 CALCRP30988 508 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 SDHAP31040 664 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 ARR3P36575 388 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 CDKN2AP42771 156 aaKnown RBP13.3□□□□□ -0.28
TRIM47-206ENST00000592942 LCN6P62502 163 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 RAB1AP62820 205 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 MRPS34P82930 218 aaKnown RBP13.3□□□□□ -0.28
TRIM47-206ENST00000592942 NAAAQ02083 359 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 CD47Q08722 323 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 DEFB113Q30KQ7 82 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 NRN1LQ496H8 165 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 C1orf146Q5VVC0 180 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 GPR139Q6DWJ6 353 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 SLC22A25Q6T423 547 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 FOXL2NBQ6ZUU3 175 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 PTCHD4Q6ZW05 846 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF584Q8IVC4 421 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 SMAP2Q8WU79 429 aaPredicted RBP13.3□□□□□ -0.28
TRIM47-206ENST00000592942 NSMAFQ92636 917 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 SAMD8Q96LT4 415 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 RBP7Q96R05 134 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 IL20Q9NYY1 176 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 EDARQ9UNE0 448 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 CCDC168Q8NDH2 2452 aa13.3□□□□□ -0.28
TRIM47-206ENST00000592942 TEX13CA0A0J9YWL9 993 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 ARPC3O15145 178 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 AHCYL1O43865 530 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 PPP1R3DO95685 299 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 IGFBP1P08833 259 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 MMP7P09237 267 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 CD79AP11912 226 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 HOXB6P17509 224 aaKnown RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 GIPRP48546 466 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 IDH3GP51553 393 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 ACTR3P61158 418 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 HGFACQ04756 655 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 CCNIQ14094 377 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 GSG1Q2KHT4 349 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF362Q5T0B9 420 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF620Q6ZNG0 422 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms