RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 SLC22A23A1A5C7 686 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 hCG_2039718K7EN88 272 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 SYNGR3O43761 229 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 AHCYL1O43865 530 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 F13BP05160 661 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 TACSTD2P09758 323 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 USF1P22415 310 aaPredicted RBP12.8□□□□□ -0.36
SF3A2-207ENST00000592839 LSM11P83369 360 aaKnown RBP eCLIP12.8□□□□□ -0.36
SF3A2-207ENST00000592839 DGCR6Q14129 220 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 IQCCQ4KMZ1 466 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 ALG10Q5BKT4 473 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 MBOAT2Q6ZWT7 520 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 MAPK1IP1LQ8NDC0 245 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 HDAC2Q92769 488 aaKnown RBP12.8□□□□□ -0.36
SF3A2-207ENST00000592839 C1orf159Q96HA4 380 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 TPD52L3Q96J77 140 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 ZNF347Q96SE7 839 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 GPX7Q96SL4 187 aaPredicted RBP12.8□□□□□ -0.36
SF3A2-207ENST00000592839 SIAEQ9HAT2 523 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 GMPR2Q9P2T1 348 aaKnown RBP12.8□□□□□ -0.36
SF3A2-207ENST00000592839 SNX13Q9Y5W8 968 aa12.8□□□□□ -0.36
SF3A2-207ENST00000592839 SHOX2O60902 331 aaPredicted RBP12.79□□□□□ -0.36
SF3A2-207ENST00000592839 SERPINI2O75830 405 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 PTHP01270 115 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 SEMG1P04279 462 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 TP53P04637 393 aaPredicted RBP12.79□□□□□ -0.36
SF3A2-207ENST00000592839 CD79AP11912 226 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 MAKP20794 623 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 DRD4P21917 467 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 FUT4P22083 530 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 CAPZA2P47755 286 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 LIMS1P48059 325 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 PTDSS1P48651 473 aaKnown RBP12.79□□□□□ -0.36
SF3A2-207ENST00000592839 NUDT2P50583 147 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 ZNF84P51523 738 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 CLRN1P58418 232 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 MRPS11P82912 194 aaKnown RBP12.79□□□□□ -0.36
SF3A2-207ENST00000592839 SPATS1Q496A3 300 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 THEM4Q5T1C6 240 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 SLC25A47Q6Q0C1 308 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 ZNF786Q8N393 782 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 OR4K5Q8NGD3 323 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 MOSPD2Q8NHP6 518 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 HSH2DQ96JZ2 352 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 PIMREGQ9BSJ6 248 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 FUZQ9BT04 418 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 MRPL37Q9BZE1 423 aaKnown RBP12.79□□□□□ -0.36
SF3A2-207ENST00000592839 GORASP2Q9H8Y8 452 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 DCAF13Q9NV06 445 aaKnown RBP12.79□□□□□ -0.36
SF3A2-207ENST00000592839 ENPP4Q9Y6X5 453 aa12.79□□□□□ -0.36
SF3A2-207ENST00000592839 A8MV72 311 aaPredicted RBP12.78□□□□□ -0.36
SF3A2-207ENST00000592839 MCIDASD6RGH6 385 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 GPRIN2O60269 458 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 PIP5K1CO60331 668 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 IGHV4-31P0DP07 118 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 IFI30P13284 250 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 HSD17B1P14061 328 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 ZNF250P15622 560 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 LSP1P33241 339 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 THBS2P35442 1172 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 PSME3P61289 254 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 RPL27P61353 136 aaKnown RBP12.78□□□□□ -0.36
SF3A2-207ENST00000592839 SF3A3Q12874 501 aaKnown RBP eCLIP12.78□□□□□ -0.363e-8■■■■■ 54.4
SF3A2-207ENST00000592839 RIN1Q13671 783 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 RAB39AQ14964 217 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 FAM27BQ5VT28 67 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 KRT80Q6KB66 452 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 CXXC5Q7LFL8 322 aaKnown RBP12.78□□□□□ -0.36
SF3A2-207ENST00000592839 FAM122BQ7Z309 247 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 NRMQ8IXM6 262 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 C1orf174Q8IYL3 243 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 CDK20Q8IZL9 346 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 SVOPLQ8N434 492 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 SLC7A13Q8TCU3 470 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 HTRA1Q92743 480 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 HPS1Q92902 700 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 NSRP1Q9H0G5 558 aaKnown RBP12.78□□□□□ -0.36
SF3A2-207ENST00000592839 MS4A5Q9H3V2 200 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 NMNAT1Q9HAN9 279 aaPredicted RBP12.78□□□□□ -0.36
SF3A2-207ENST00000592839 RPS6KA6Q9UK32 745 aa12.78□□□□□ -0.36
SF3A2-207ENST00000592839 IGKV1D-43A0A0B4J1Z2 117 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 A6NIZ1 184 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 J3KTA2 159 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 M0R233 179 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 CDC42EP2O14613 210 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 LY6HO94772 140 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 STAMBPO95630 424 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 SERPINA1P01009 418 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 ERCC1P07992 297 aaPredicted RBP12.77□□□□□ -0.37
SF3A2-207ENST00000592839 ZNF23P17027 643 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 RHCEP18577 417 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 GZMKP49863 264 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 SEC24CP53992 1094 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 RAP1BP61224 184 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 RAP1AP62834 184 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 PIGFQ07326 219 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 LAPTM4AQ15012 233 aa12.77□□□□□ -0.37
SF3A2-207ENST00000592839 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms