RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 SVOPLQ8N434 492 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 RNF148Q8N7C7 305 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 FAM156AQ8NDB6 213 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 ZNF519Q8TB69 540 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 SLC7A13Q8TCU3 470 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 FAM168AQ92567 244 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 TNFRSF13CQ96RJ3 184 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 ANKRD19PQ9H560 264 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 NMNAT1Q9HAN9 279 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-239ENST00000592467 ARL8BQ9NVJ2 186 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 NDUFAF4Q9P032 175 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 CD300AQ9UGN4 299 aa17.39■□□□□ 0.37
CIRBP-239ENST00000592467 ZNF346Q9UL40 294 aaKnown RBP17.39■□□□□ 0.37
CIRBP-239ENST00000592467 SONP18583 2426 aaKnown RBP17.38■□□□□ 0.37
CIRBP-239ENST00000592467 RTTNQ86VV8 2226 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 CD5LO43866 347 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 RAB36O95755 333 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 SEMG1P04279 462 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 SLC25A16P16260 332 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 IFNA8P32881 189 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 RPL27P61353 136 aaKnown RBP17.38■□□□□ 0.37
CIRBP-239ENST00000592467 TAF11Q15544 211 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 TMPRSS11FQ6ZWK6 438 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 HDDC2Q7Z4H3 204 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 PRIMA1Q86XR5 153 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 ZCCHC24Q8N2G6 241 aaKnown RBP17.38■□□□□ 0.37
CIRBP-239ENST00000592467 PAQR4Q8N4S7 273 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-239ENST00000592467 CLDN22Q8N7P3 220 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 OR13C2Q8NGS9 318 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 OR51A7Q8NH64 312 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 MRPL24Q96A35 216 aaKnown RBP17.38■□□□□ 0.37
CIRBP-239ENST00000592467 TSPAN32Q96QS1 320 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 FUZQ9BT04 418 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 MRPL37Q9BZE1 423 aaKnown RBP17.38■□□□□ 0.37
CIRBP-239ENST00000592467 GORASP2Q9H8Y8 452 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 SMURF2Q9HAU4 748 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 FBXL3Q9UKT7 428 aa17.38■□□□□ 0.37
CIRBP-239ENST00000592467 ABCA2Q9BZC7 2435 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 EFCAB9A8MZ26 197 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 CSF3P09919 207 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 HSD17B1P14061 328 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 CDAP32320 146 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 GLRXP35754 106 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 CTXN1P60606 82 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 MRPS34P82930 218 aaKnown RBP17.37■□□□□ 0.37
CIRBP-239ENST00000592467 VLDLRP98155 873 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 ANKDD1AQ495B1 522 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 DHRS1Q96LJ7 313 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 VRK1Q99986 396 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-239ENST00000592467 ADA2Q9NZK5 511 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 STX18Q9P2W9 335 aaKnown RBP17.37■□□□□ 0.37
CIRBP-239ENST00000592467 RPS6KA6Q9UK32 745 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 ARL2BPQ9Y2Y0 163 aa17.37■□□□□ 0.37
CIRBP-239ENST00000592467 DNHD1Q96M86 4753 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 A0A1W2PRQ8 180 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 MGRN1O60291 552 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 FARS2O95363 451 aaKnown RBP17.36■□□□□ 0.37
CIRBP-239ENST00000592467 SAGP10523 405 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-239ENST00000592467 GPR4P46093 362 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 LIMS1P48059 325 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 SLC9A3P48764 834 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 EVX1P49640 407 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 ZNF84P51523 738 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 TOP3AQ13472 1001 aaPredicted RBP17.36■□□□□ 0.37
CIRBP-239ENST00000592467 DGCR6Q14129 220 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 TMEM249Q2WGJ8 235 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 PODNL1Q6PEZ8 512 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 ZNF730Q6ZMV8 503 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 FOXL2NBQ6ZUU3 175 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 SLC16A14Q7RTX9 510 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 DPPA2Q7Z7J5 298 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 OAFQ86UD1 273 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 PGAM4Q8N0Y7 254 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 ALG12Q9BV10 488 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 SIAEQ9HAT2 523 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 TAGLN3Q9UI15 199 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 ADAM21Q9UKJ8 722 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 CMAHPQ9Y471 501 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 FKBP7Q9Y680 259 aa17.36■□□□□ 0.37
CIRBP-239ENST00000592467 CUBNO60494 3623 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 ENTPD5O75356 428 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 PTP4A3O75365 173 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 OMPP47874 163 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 PDLIM4P50479 330 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 SEC23BQ15437 767 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 FAM122BQ7Z309 247 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 LRP11Q86VZ4 500 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 LRRC18Q8N456 261 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 CPEB3Q8NE35 698 aaKnown RBP17.35■□□□□ 0.37
CIRBP-239ENST00000592467 SLC30A7Q8NEW0 376 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 MYEF2Q9P2K5 600 aaKnown RBP17.35■□□□□ 0.37
CIRBP-239ENST00000592467 SLC7A8Q9UHI5 535 aa17.35■□□□□ 0.37
CIRBP-239ENST00000592467 FBXO9Q9UK97 447 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-239ENST00000592467 SAMD4AQ9UPU9 718 aaKnown RBP17.35■□□□□ 0.37
CIRBP-239ENST00000592467 NDUFS8O00217 210 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 CRLF1O75462 422 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 DIRAS1O95057 198 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 H1F0P07305 194 aaKnown RBP17.34■□□□□ 0.37
CIRBP-239ENST00000592467 CCL2P13500 99 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 RHCEP18577 417 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms