RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PGAM4Q8N0Y7 254 aa13.12□□□□□ -0.31
ERCC1-213ENST00000592023 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
ERCC1-213ENST00000592023 NSMAFQ92636 917 aa13.12□□□□□ -0.31
ERCC1-213ENST00000592023 LRRC37BQ96QE4 947 aa13.12□□□□□ -0.31
ERCC1-213ENST00000592023 NMNAT1Q9HAN9 279 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-213ENST00000592023 ARL8BQ9NVJ2 186 aa13.12□□□□□ -0.31
ERCC1-213ENST00000592023 TAGLN3Q9UI15 199 aa13.12□□□□□ -0.31
ERCC1-213ENST00000592023 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
ERCC1-213ENST00000592023 SETD2Q9BYW2 2564 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-213ENST00000592023 NF1P21359 2839 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 A0A096LNT2 108 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 SH3PXD2BA1X283 911 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 CDC42EP2O14613 210 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 DCTN3O75935 186 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 DIRAS1O95057 198 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 F12P00748 615 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 SERPINA5P05154 406 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 H1F0P07305 194 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 NR2C1P13056 603 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 SLC25A16P16260 332 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 CDAP32320 146 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 RPL27P61353 136 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 TAF11Q15544 211 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 MSMPQ1L6U9 139 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 RRM2BQ7LG56 351 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 PIGWQ7Z7B1 504 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 RNF113BQ8IZP6 322 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 LRRC18Q8N456 261 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 LRRC75AQ8NAA5 344 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 SLC30A7Q8NEW0 376 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 C10orf105Q8TEF2 133 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 NMD3Q96D46 503 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 TSPAN32Q96QS1 320 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 TNFRSF13CQ96RJ3 184 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 MRPL37Q9BZE1 423 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 ANKRD19PQ9H560 264 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 DCAF13Q9NV06 445 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 NDUFAF4Q9P032 175 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 MAGEL2Q9UJ55 1249 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 ZNF346Q9UL40 294 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 FAM32AQ9Y421 112 aaKnown RBP13.11□□□□□ -0.31
ERCC1-213ENST00000592023 CMAHPQ9Y471 501 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 SPEF1Q9Y4P9 236 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 UGT2A1Q9Y4X1 527 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 ZFHX3Q15911 3703 aa13.11□□□□□ -0.31
ERCC1-213ENST00000592023 FN1P02751 2386 aaKnown RBP13.1□□□□□ -0.31
ERCC1-213ENST00000592023 H7C1C5 153 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 CCL2P13500 99 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 RPL4P36578 427 aaKnown RBP13.1□□□□□ -0.31
ERCC1-213ENST00000592023 SLC9A3P48764 834 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 PDLIM4P50479 330 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 ZNF133P52736 654 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-213ENST00000592023 RPS23P62266 143 aaKnown RBP13.1□□□□□ -0.31
ERCC1-213ENST00000592023 LCN6P62502 163 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
ERCC1-213ENST00000592023 MXRA7P84157 204 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 VLDLRP98155 873 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 FHL1Q13642 323 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 KRTAP21-3Q3LHN1 58 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 NRN1LQ496H8 165 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 FAM205BPQ63HN1 556 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 PODNL1Q6PEZ8 512 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 DPPA2Q7Z7J5 298 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 ZNF519Q8TB69 540 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 SLC7A13Q8TCU3 470 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 MRPL24Q96A35 216 aaKnown RBP13.1□□□□□ -0.31
ERCC1-213ENST00000592023 DOK1Q99704 481 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 SYT3Q9BQG1 590 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 ALG12Q9BV10 488 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 RAB1BQ9H0U4 201 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 OR51B6Q9H340 312 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 TPK1Q9H3S4 243 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 SMURF2Q9HAU4 748 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 CDH20Q9HBT6 801 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 SLC7A8Q9UHI5 535 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 FZR1Q9UM11 496 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
ERCC1-213ENST00000592023 TRBV4-1A0A0J9YWV2 114 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 A0A1W2PPL8 197 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 TMEM129A0AVI4 362 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 ARPC2O15144 300 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-213ENST00000592023 FAM157BP0CG42 384 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 HSD17B1P14061 328 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 RHCEP18577 417 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
ERCC1-213ENST00000592023 GLRXP35754 106 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 ERVK-25P63136 954 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 HSF2Q03933 536 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 SGCAQ16586 387 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 FXNQ16595 210 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 TBC1D28Q2M2D7 210 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 ANKDD1AQ495B1 522 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 SAMD4BQ5PRF9 694 aaKnown RBP13.09□□□□□ -0.31
ERCC1-213ENST00000592023 C16orf89Q6UX73 402 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 TMPRSS11FQ6ZWK6 438 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 DEFB107AQ8IZN7 70 aa13.09□□□□□ -0.31
ERCC1-213ENST00000592023 ZCCHC24Q8N2G6 241 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms