RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 TMEM43Q9BTV4 400 aa12.93□□□□□ -0.34
ACTN4-211ENST00000589528 KCNN2Q9H2S1 579 aa12.93□□□□□ -0.34
ACTN4-211ENST00000589528 SSU72Q9NP77 194 aaKnown RBP12.93□□□□□ -0.34
ACTN4-211ENST00000589528 TCF7L2Q9NQB0 619 aa12.93□□□□□ -0.34
ACTN4-211ENST00000589528 ZIM2Q9NZV7 527 aa12.93□□□□□ -0.34
ACTN4-211ENST00000589528 AUP1Q9Y679 476 aa12.93□□□□□ -0.34
ACTN4-211ENST00000589528 A0A0G2JK05 382 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 PRORSD1PA6NEY8 169 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 POM121CA8CG34 1229 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 ZNF500O60304 480 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 IGHV3-13P01766 116 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 QDPRP09417 244 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 ZFP36P26651 326 aaKnown RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 ZNF84P51523 738 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 CDH12P55289 794 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 CLRN1P58418 232 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 ZNF718Q3SXZ3 478 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 GCNT6Q5T4J0 391 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 SWT1Q5T5J6 900 aaKnown RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 HHATQ5VTY9 493 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 WDR88Q6ZMY6 472 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 LRRC18Q8N456 261 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 BHLHE22Q8NFJ8 381 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 SLC25A44Q96H78 314 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 MRI1Q9BV20 369 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 MS4A7Q9GZW8 240 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 CENPHQ9H3R5 247 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 PLEK2Q9NYT0 353 aa12.92□□□□□ -0.34
ACTN4-211ENST00000589528 EIF3KQ9UBQ5 218 aaKnown RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 PURGQ9UJV8 347 aaKnown RBP12.92□□□□□ -0.34
ACTN4-211ENST00000589528 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 PPIAL4CA0A0B4J2A2 164 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 PPIAL4DF5H284 164 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 UBDO15205 165 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 TPST1O60507 370 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 MFN2O95140 757 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 IGHV1-46P01743 117 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 IGHG1P01857 330 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 HIST1H2ABP04908 130 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 CDK6Q00534 326 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 SPATA46Q5T0L3 261 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 LRFN4Q6PJG9 635 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 NHLRC1Q6VVB1 395 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 HIST3H2AQ7L7L0 130 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 COMTD1Q86VU5 262 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 HIPK4Q8NE63 616 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 OR9I1Q8NGQ6 314 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 GTF2H4Q92759 462 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 HIST1H2ACQ93077 130 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 LRRC58Q96CX6 371 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 CCNB1IP1Q9NPC3 277 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 NANSQ9NR45 359 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 ZNF69Q9UC07 566 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 LEF1Q9UJU2 399 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-211ENST00000589528 DOCK11Q5JSL3 2073 aa12.91□□□□□ -0.34
ACTN4-211ENST00000589528 MCIDASD6RGH6 385 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 SERPINB7O75635 380 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 CH25HO95992 272 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.34
ACTN4-211ENST00000589528 SBK2P0C263 348 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 UMPSP11172 480 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 BMP2P12643 396 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 SLC6A2P23975 617 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 VSNL1P62760 191 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 ZNF154Q13106 437 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 SLC2A7Q6PXP3 512 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 ARMC8Q8IUR7 673 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 ANKRD42Q8N9B4 389 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 TMEM109Q9BVC6 243 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 PAIP1Q9H074 479 aaKnown RBP12.9□□□□□ -0.34
ACTN4-211ENST00000589528 EVA1AQ9H8M9 152 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 SDR39U1Q9NRG7 319 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-211ENST00000589528 CYSLTR2Q9NS75 346 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 THAP1Q9NVV9 213 aa12.9□□□□□ -0.34
ACTN4-211ENST00000589528 UBOX5O94941 541 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 IGHMP01871 453 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 PGA4P0DJD7 388 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 PGA3P0DJD8 388 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 PPIBP23284 216 aaKnown RBP12.89□□□□□ -0.35
ACTN4-211ENST00000589528 STOMP27105 288 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 AQP1P29972 269 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 LIPAP38571 399 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 SCARB2Q14108 478 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 NRN1LQ496H8 165 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 ZMAT1Q5H9K5 638 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 PABPC1L2AQ5JQF8 200 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 THEM4Q5T1C6 240 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 TTC33Q6PID6 262 aaPredicted RBP12.89□□□□□ -0.35
ACTN4-211ENST00000589528 BCL6BQ8N143 479 aaPredicted RBP12.89□□□□□ -0.35
ACTN4-211ENST00000589528 SPICQ8N5J4 248 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
ACTN4-211ENST00000589528 DCLRE1CQ96SD1 692 aaKnown RBP12.89□□□□□ -0.35
ACTN4-211ENST00000589528 MCHR1Q99705 422 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 SLC19A3Q9BZV2 496 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 MMP26Q9NRE1 261 aa12.89□□□□□ -0.35
ACTN4-211ENST00000589528 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms