RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 OBP2BQ9NPH6 170 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 ZNF226Q9NYT6 803 aa17.2■□□□□ 0.34
CIRBP-220ENST00000588917 OR5H1A6NKK0 313 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 C19orf84I3L1E1 186 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 EI24O14681 340 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 RAD51DO75771 328 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 ALPLP05186 524 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 IGFBP1P08833 259 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-220ENST00000588917 HIST1H1CP16403 213 aaKnown RBP17.19■□□□□ 0.34
CIRBP-220ENST00000588917 NPR2P20594 1047 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 CDKN2AP42771 156 aaKnown RBP17.19■□□□□ 0.34
CIRBP-220ENST00000588917 ARF1P84077 181 aaKnown RBP17.19■□□□□ 0.34
CIRBP-220ENST00000588917 PTGES3Q15185 160 aaKnown RBP17.19■□□□□ 0.34
CIRBP-220ENST00000588917 SLC35F1Q5T1Q4 408 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 C9orf135Q5VTT2 229 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 ANKRD34AQ69YU3 496 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 LEG1Q6P5S2 330 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 SLC25A47Q6Q0C1 308 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 ACBD4Q8NC06 268 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 OR52E2Q8NGJ4 325 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 OR1K1Q8NGR3 316 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 OR4K13Q8NH42 304 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 FAM222BQ8WU58 562 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 S100PBPQ96BU1 408 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 NMD3Q96D46 503 aaKnown RBP17.19■□□□□ 0.34
CIRBP-220ENST00000588917 NGBQ9NPG2 151 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 TMEFF2Q9UIK5 374 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-220ENST00000588917 PCNX1Q96RV3 2341 aa17.19■□□□□ 0.34
CIRBP-220ENST00000588917 SH3D21A4FU49 640 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 RIIAD1A6NNX1 92 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 FARS2O95363 451 aaKnown RBP17.18■□□□□ 0.34
CIRBP-220ENST00000588917 WNT11O96014 354 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 EPXP11678 715 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 COX6B1P14854 86 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 FOXG1P55316 489 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-220ENST00000588917 SLC34A1Q06495 639 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.18■□□□□ 0.34
CIRBP-220ENST00000588917 NPRL3Q12980 569 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 TRIP10Q15642 601 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 PGGHGQ32M88 737 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 KLHL24Q6TFL4 600 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 BCL2L2Q92843 193 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-220ENST00000588917 WFIKKN1Q96NZ8 548 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 SLC38A2Q96QD8 506 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 NMNAT3Q96T66 252 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 FOXB1Q99853 325 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 SLC25A19Q9HC21 320 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 CMC2Q9NRP2 79 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 AMDHD2Q9Y303 409 aa17.18■□□□□ 0.34
CIRBP-220ENST00000588917 KHDRBS3O75525 346 aaKnown RBP17.17■□□□□ 0.34
CIRBP-220ENST00000588917 OR8G3PP0DMU2 310 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 PRF1P14222 555 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 ZNF3P17036 446 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 UBE2NP61088 152 aaKnown RBP17.17■□□□□ 0.34
CIRBP-220ENST00000588917 RIPK1Q13546 671 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 TSC22D1Q15714 1073 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 ZNF813Q6ZN06 617 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 PTCHD4Q6ZW05 846 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 DPPA2Q7Z7J5 298 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 PACRGLQ8N7B6 248 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 OR4Q3Q8NH05 313 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 LINC01560Q8TB33 94 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 ZNF837Q96EG3 531 aaPredicted RBP17.17■□□□□ 0.34
CIRBP-220ENST00000588917 PLEKHA8Q96JA3 519 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 GABARAPL3Q9BY60 117 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 SYT4Q9H2B2 425 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 KCNN2Q9H2S1 579 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 SLC17A5Q9NRA2 495 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 KCNN3Q9UGI6 736 aa17.17■□□□□ 0.34
CIRBP-220ENST00000588917 CASQ2O14958 399 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-220ENST00000588917 SLC16A7O60669 478 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 MITFO75030 526 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-220ENST00000588917 GOSR1O95249 250 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 PAICSP22234 425 aaKnown RBP17.16■□□□□ 0.34
CIRBP-220ENST00000588917 CCKARP32238 428 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 MRPS34P82930 218 aaKnown RBP17.16■□□□□ 0.34
CIRBP-220ENST00000588917 ZNF362Q5T0B9 420 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-220ENST00000588917 ACSM5Q6NUN0 579 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 NPEPL1Q8NDH3 523 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 NANOS1Q8WY41 292 aaKnown RBP17.16■□□□□ 0.34
CIRBP-220ENST00000588917 RDH12Q96NR8 316 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 NUAK2Q9H093 628 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 SIAEQ9HAT2 523 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 RNPEPL1Q9HAU8 725 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 SRA1Q9HD15 236 aaKnown RBP17.16■□□□□ 0.34
CIRBP-220ENST00000588917 TMEM38BQ9NVV0 291 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 FKBP7Q9Y680 259 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 CSMD1Q96PZ7 3565 aa17.16■□□□□ 0.34
CIRBP-220ENST00000588917 APCP25054 2843 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 H7C1C5 153 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 SLC2A10O95528 541 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 CENPAP49450 140 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 LCN6P62502 163 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 FMODQ06828 376 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 PPA1Q15181 289 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 TBRG1Q3YBR2 411 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 GLB1L2Q8IW92 636 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 SLC22A24Q8N4F4 322 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 SLC37A3Q8NCC5 494 aa17.15■□□□□ 0.34
CIRBP-220ENST00000588917 SDR9C7Q8NEX9 313 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms