RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SAMD8Q96LT4 415 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 WFIKKN1Q96NZ8 548 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 FUNDC2Q9BWH2 189 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ANGPTL4Q9BY76 406 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ADAM19Q9H013 955 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 DSN1Q9H410 356 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 PTGES2Q9H7Z7 377 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 METTL7AQ9H8H3 244 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ISYNA1Q9NPH2 558 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 MEPEQ9NQ76 525 aaPredicted RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 C20orf141Q9NUB4 165 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 BEX4Q9NWD9 120 aaPredicted RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 TAS2R10Q9NYW0 307 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 DNAJC27Q9NZQ0 273 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 KLRF1Q9NZS2 232 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 PPP4R1LQ9P1A2 415 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 FOXD3Q9UJU5 478 aaPredicted RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 HIF3AQ9Y2N7 669 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ATRQ13535 2644 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 STAB1Q9NY15 2570 aa6.96□□□□□ -1.29
VMP1-204ENST00000587259 HIVEP2P31629 2446 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 A0A087WZY1 265 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 A8MVM7 634 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 DEFB108AA8MXU0 73 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 H0YC42 278 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 CCRL2O00421 344 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 ZNF208O43345 1280 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SCO2O43819 266 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 ADAM11O75078 769 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 PTP4A3O75365 173 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 TNFSF13O75888 250 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 INMTO95050 263 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 AHSA1O95433 338 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 TGM6O95932 706 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 BCL10O95999 233 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 FUT1P19526 365 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 GTF2E2P29084 291 aaKnown RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 TACR3P29371 465 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 C21orf33P30042 268 aaPredicted RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 CCKARP32238 428 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 OPRM1P35372 400 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 ATP6V1E1P36543 226 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 RPL4P36578 427 aaKnown RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 PEX19P40855 299 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 EIF1P41567 113 aaKnown RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 CENPAP49450 140 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 WNT4P56705 351 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 TUBA1BP68363 451 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SIRPAP78324 504 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SORDQ00796 357 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 MLLT11Q13015 90 aaPredicted RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 LSAMPQ13449 338 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 QPRTQ15274 297 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SPHARQ15513 63 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 MED22Q15528 200 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 ZNF74Q16587 644 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SLC35D3Q5M8T2 416 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 FAM69AQ5T7M9 428 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 AADACL4Q5VUY2 407 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SHEQ5VZ18 495 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 TIGD3Q6B0B8 471 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 NIPAL3Q6P499 406 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 VWA1Q6PCB0 445 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 CBLN3Q6UW01 205 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 GDPGP1Q6ZNW5 385 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 TUBA1AQ71U36 451 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 NANOGNBQ7Z5D8 188 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 PM20D2Q8IYS1 436 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 POMGNT2Q8NAT1 580 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 KBTBD8Q8NFY9 601 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 OR1J4Q8NGS1 313 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 OR4Q3Q8NH05 313 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 OR14L1PQ8NHC6 308 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 HAVCR2Q8TDQ0 301 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SLC25A43Q8WUT9 341 aaPredicted RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 NANOS1Q8WY41 292 aaKnown RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 HGDQ93099 445 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 YIPF6Q96EC8 236 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 RNFT2Q96EX2 444 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 MRGPRX4Q96LA9 322 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 DACH2Q96NX9 599 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 CCL19Q99731 98 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 OPN3Q9H1Y3 402 aaPredicted RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 CALHM2Q9HA72 323 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SERINC1Q9NRX5 453 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 HAO2Q9NYQ3 351 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 FBXL2Q9UKC9 423 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 CORINQ9Y5Q5 1042 aa6.96□□□□□ -1.3
VMP1-204ENST00000587259 SONP18583 2426 aaKnown RBP6.96□□□□□ -1.3
VMP1-204ENST00000587259 TRAV27A0A087WT01 109 aa6.95□□□□□ -1.3
VMP1-204ENST00000587259 ANKRD33BA6NCL7 494 aa6.95□□□□□ -1.3
VMP1-204ENST00000587259 ETV2O00321 342 aaPredicted RBP6.95□□□□□ -1.3
VMP1-204ENST00000587259 CASKO14936 926 aa6.95□□□□□ -1.3
VMP1-204ENST00000587259 AKAP8O43823 692 aaKnown RBP6.95□□□□□ -1.3
VMP1-204ENST00000587259 SCG5P05408 212 aa6.95□□□□□ -1.3
VMP1-204ENST00000587259 CD14P08571 375 aa6.95□□□□□ -1.3
VMP1-204ENST00000587259 IGFBP1P08833 259 aaPredicted RBP6.95□□□□□ -1.3
VMP1-204ENST00000587259 ASAH2BP0C7U1 165 aa6.95□□□□□ -1.3
VMP1-204ENST00000587259 CD36P16671 472 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms