RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 IGFBP5P24593 272 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 GRK5P34947 590 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 UBE2NP61088 152 aaKnown RBP16.79■□□□□ 0.28
DDX39A-204ENST00000586558 LCN6P62502 163 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 ELF3P78545 371 aaPredicted RBP16.79■□□□□ 0.28
DDX39A-204ENST00000586558 FMODQ06828 376 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 RCN1Q15293 331 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 HIKESHIQ53FT3 197 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 DNM1P34Q6PK57 102 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 SLC25A47Q6Q0C1 308 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 PTCHD4Q6ZW05 846 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 OR4K13Q8NH42 304 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 CIB1Q99828 191 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 C9orf16Q9BUW7 83 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 TEX12Q9BXU0 123 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 NELFAQ9H3P2 528 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 TMEM38BQ9NVV0 291 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 KLHL21Q9UJP4 597 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 SLC25A15Q9Y619 301 aa16.79■□□□□ 0.28
DDX39A-204ENST00000586558 IFNGP01579 166 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 B4GALT1P15291 398 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 POU1F1P28069 291 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 CRABP1P29762 137 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 CDKN2AP42771 156 aaKnown RBP16.78■□□□□ 0.28
DDX39A-204ENST00000586558 GIPRP48546 466 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 MRPS34P82930 218 aaKnown RBP16.78■□□□□ 0.28
DDX39A-204ENST00000586558 SLC35F1Q5T1Q4 408 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 C22orf34Q6ZV56 151 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 ZNF771Q7L3S4 317 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-204ENST00000586558 WFDC8Q8IUA0 241 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 WDR31Q8NA23 367 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 OR4Q3Q8NH05 313 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 MARVELD3Q96A59 401 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 C14orf79Q96F83 325 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 ZC3HAV1LQ96H79 300 aaKnown RBP16.78■□□□□ 0.28
DDX39A-204ENST00000586558 SYT4Q9H2B2 425 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 SLC25A19Q9HC21 320 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 USE1Q9NZ43 259 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 TMEFF2Q9UIK5 374 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-204ENST00000586558 UGT2A1Q9Y4X1 527 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 UNC79Q9P2D8 2635 aa16.78■□□□□ 0.28
DDX39A-204ENST00000586558 A0A096LPE4 126 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 A0A1W2PPZ6 126 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 RIIAD1A6NNX1 92 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 FARS2O95363 451 aaKnown RBP16.77■□□□□ 0.28
DDX39A-204ENST00000586558 HMGN1P05114 100 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 ALPLP05186 524 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 OR8G3PP0DMU2 310 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 ANPEPP15144 967 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 NPR2P20594 1047 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 GUCA1AP43080 201 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-204ENST00000586558 CRISP1P54107 249 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 CDK5Q00535 292 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDX39A-204ENST00000586558 DAG1Q14118 895 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 GINS1Q14691 196 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 LEG1Q6P5S2 330 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 FOXL2NBQ6ZUU3 175 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 DPPA2Q7Z7J5 298 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 NPEPL1Q8NDH3 523 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 OR52E2Q8NGJ4 325 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 OR52N5Q8NH56 324 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 NANOS1Q8WY41 292 aaKnown RBP16.77■□□□□ 0.28
DDX39A-204ENST00000586558 NMNAT3Q96T66 252 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 CMC2Q9NRP2 79 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 ORC6Q9Y5N6 252 aa16.77■□□□□ 0.28
DDX39A-204ENST00000586558 PKDREJQ9NTG1 2253 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 IGKV1D-43A0A0B4J1Z2 117 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 A6NNC1 897 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 EI24O14681 340 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 KHDRBS3O75525 346 aaKnown RBP16.76■□□□□ 0.27
DDX39A-204ENST00000586558 SEC14L2O76054 403 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 CTLA4P16410 223 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 ZNF3P17036 446 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 SSTR2P30874 369 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 BEX5Q5H9J7 111 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 SEZ6L2Q6UXD5 910 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 SLC22A24Q8N4F4 322 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 CBR4Q8N4T8 237 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 IQCF1Q8N6M8 205 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 FAM169BQ8N8A8 192 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 SDR9C7Q8NEX9 313 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 NSMAFQ92636 917 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 EME1Q96AY2 570 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 PRRG3Q9BZD7 231 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 NUAK2Q9H093 628 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 DCLRE1BQ9H816 532 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 SIAEQ9HAT2 523 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 CENPEQ02224 2701 aa16.76■□□□□ 0.27
DDX39A-204ENST00000586558 SLC16A7O60669 478 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 MITFO75030 526 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-204ENST00000586558 ALDH3A2P51648 485 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 RAD23AP54725 363 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 NR1H2P55055 460 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 ZNF362Q5T0B9 420 aaPredicted RBP16.75■□□□□ 0.27
DDX39A-204ENST00000586558 ZNF787Q6DD87 383 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 HIST2H2BCQ6DN03 193 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 ZBTB49Q6ZSB9 765 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 GABARAPL3Q9BY60 117 aa16.75■□□□□ 0.27
DDX39A-204ENST00000586558 RACGAP1Q9H0H5 632 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms