RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TRIM33Q9UPN9 1127 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 SLC22A23A1A5C7 686 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 CLDN25C9JDP6 229 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 CH25HO95992 272 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 QDPRP09417 244 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 LSP1P33241 339 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 RAD52P43351 418 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 MRPL19P49406 292 aaKnown RBP10.06□□□□□ -0.8
BRCA1-225ENST00000586385 SCARB2Q14108 478 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 HHATQ5VTY9 493 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 DOK3Q7L591 496 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 PTOV1Q86YD1 416 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 RBM45Q8IUH3 476 aaKnown RBP10.06□□□□□ -0.8
BRCA1-225ENST00000586385 GOLGA6L1Q8N7Z2 621 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 SMYD1Q8NB12 490 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 SNX33Q8WV41 574 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 C11orf40Q8WZ69 217 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF566Q969W8 418 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 MARS2Q96GW9 593 aaKnown RBP10.06□□□□□ -0.8
BRCA1-225ENST00000586385 SLC25A44Q96H78 314 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF347Q96SE7 839 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 MCHR1Q99705 422 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 ARHGDIGQ99819 225 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 MRPL13Q9BYD1 178 aaKnown RBP10.06□□□□□ -0.8
BRCA1-225ENST00000586385 TMEM38AQ9H6F2 299 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF69Q9UC07 566 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 UGT2A1Q9Y4X1 527 aa10.06□□□□□ -0.8
BRCA1-225ENST00000586385 LOC100509620A0A075B734 347 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 IGKV1D-43A0A0B4J1Z2 117 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 TMEM120BA0PK00 339 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 DNAJC9-AS1A6NH13 148 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 SPRY3O43610 288 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 CHP2O43745 196 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 MGRN1O60291 552 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 GPX2P18283 190 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 GATA3P23771 443 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 PRTN3P24158 256 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF81P51508 661 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF133P52736 654 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 PCBP3P57721 371 aaKnown RBP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 SELENOVP59797 346 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 NCALDP61601 193 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 DEFA6Q01524 100 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 TEKQ02763 1124 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 FOXL1Q12952 345 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 DUSP7Q16829 419 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 TBC1D28Q2M2D7 210 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 HFEQ30201 348 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 CEP85LQ5SZL2 805 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 SPATA46Q5T0L3 261 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 TMEM53Q6P2H8 277 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF613Q6PF04 617 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 BLOC1S3Q6QNY0 202 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 SLC16A14Q7RTX9 510 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 KRT73Q86Y46 540 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 ICA1LQ8NDH6 482 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 OR6T1Q8NGN1 323 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 OR1J1Q8NGS3 322 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 IPCEF1Q8WWN9 437 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 CCL17Q92583 94 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 RAB1CQ92928 201 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 MCHR2Q969V1 340 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 NABP1Q96AH0 204 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 POM121L2Q96KW2 1035 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 GAL3ST1Q99999 423 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF426Q9BUY5 554 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 SPATA5L1Q9BVQ7 753 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 BCL2L14Q9BZR8 327 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 CENPHQ9H3R5 247 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 RNF121Q9H920 327 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 NPHS2Q9NP85 383 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 DDX28Q9NUL7 540 aaKnown RBP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 SELENONQ9NZV5 590 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 GPR160Q9UJ42 338 aa10.05□□□□□ -0.8
BRCA1-225ENST00000586385 SOX21Q9Y651 276 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 V9GYY5 206 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-225ENST00000586385 PPIAL4EA0A075B759 164 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 PPIAL4CA0A0B4J2A2 164 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 PRORSD1PA6NEY8 169 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 CPSF4LA6NMK7 179 aaKnown RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 PPIAL4DF5H284 164 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 FMO6PO60774 539 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 IGHV2-70P01814 119 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 OPN1SWP03999 348 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 ADH4P08319 380 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 ASAH2BP0C7U1 165 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 PPIAL4FP0DN26 164 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 CDAP32320 146 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 SEC61A1P61619 476 aaKnown RBP10.04□□□□□ -0.8
BRCA1-225ENST00000586385 SLC36A2Q495M3 483 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 NRN1LQ496H8 165 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 PABPC1L2AQ5JQF8 200 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 FAM209AQ5JX71 171 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 THEM4Q5T1C6 240 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 EPGNQ6UW88 154 aa10.04□□□□□ -0.8
BRCA1-225ENST00000586385 TREML4Q6UXN2 200 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms