RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 E2F6O75461 281 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 IGHG1P01857 330 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 CTXN1P60606 82 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 SNRPD2P62316 118 aaKnown RBP16.3■□□□□ 0.2
ATG4D-203ENST00000585752 CEACAM16Q2WEN9 425 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 B3GLCTQ6Y288 498 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 OR6X1Q8NH79 312 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 MAGEE2Q8TD90 523 aaPredicted RBP16.3■□□□□ 0.2
ATG4D-203ENST00000585752 GNPDA2Q8TDQ7 276 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 ZNF566Q969W8 418 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 LRR1Q96L50 414 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 TNFRSF13CQ96RJ3 184 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 ULBP2Q9BZM5 246 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 CRLF2Q9HC73 371 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 GPR35Q9HC97 309 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 FKBP7Q9Y680 259 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 U3KQV3 271 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 NAV3Q8IVL0 2385 aa16.3■□□□□ 0.2
ATG4D-203ENST00000585752 ARPC4-TTLL3A0A0A6YYG9 625 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 IGHV1-18A0A0C4DH31 117 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 RPL36A-HNRNPH2H7BZ11 118 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 FKBP6O75344 327 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 ZNF432O94892 652 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 NR2C1P13056 603 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 OMPP47874 163 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 TUBA1BP68363 451 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 TUBA4AP68366 448 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 ARF1P84077 181 aaKnown RBP16.29■□□□□ 0.2
ATG4D-203ENST00000585752 GK3PQ14409 553 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 C11orf71Q6IPW1 123 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 VHLLQ6RSH7 139 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 TUBA1AQ71U36 451 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 CCDC36Q8IYA8 594 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 SLC25A44Q96H78 314 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-203ENST00000585752 KATNB1Q9BVA0 655 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 POFUT2Q9Y2G5 429 aa16.29■□□□□ 0.2
ATG4D-203ENST00000585752 CHD3Q12873 2000 aaKnown RBP16.29■□□□□ 0.2
ATG4D-203ENST00000585752 H7C417 338 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 CDC42EP2O14613 210 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 NDUFB2O95178 105 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 CSF3P09919 207 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 ARHGDIAP52565 204 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 NPRL3Q12980 569 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 C3orf36Q3SXR2 165 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 FAM205BPQ63HN1 556 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 LINGO2Q7L985 606 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 IGFN1Q86VF2 1251 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 C20orf196Q8IYI0 205 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 TMEM123Q8N131 208 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 OR4F15Q8NGB8 312 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 FANK1Q8TC84 345 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 FAM168AQ92567 244 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 HTRA1Q92743 480 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 VRK1Q99986 396 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-203ENST00000585752 FUZQ9BT04 418 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 TXNIPQ9H3M7 391 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 YAE1D1Q9NRH1 226 aa16.28■□□□□ 0.2
ATG4D-203ENST00000585752 A6NIZ1 184 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 NPIPB13A6NJU9 1138 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 NPIPB4C9JG80 1138 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 XKRYO14609 159 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 DEAF1O75398 565 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-203ENST00000585752 TSPAN19P0C672 248 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 SLC25A16P16260 332 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 FPR3P25089 353 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 ARR3P36575 388 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 SERPINF1P36955 418 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 EFNA4P52798 201 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 HMGA2P52926 109 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 RAP1BP61224 184 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 RPL27P61353 136 aaKnown RBP16.27■□□□□ 0.2
ATG4D-203ENST00000585752 RAP1AP62834 184 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 PPP1R8Q12972 351 aaKnown RBP16.27■□□□□ 0.2
ATG4D-203ENST00000585752 C10orf67Q8IYJ2 551 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 IL17RDQ8NFM7 739 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 ASB10Q8WXI3 467 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 NANOS1Q8WY41 292 aaKnown RBP16.27■□□□□ 0.2
ATG4D-203ENST00000585752 GRHPRQ9UBQ7 328 aa16.27■□□□□ 0.2
ATG4D-203ENST00000585752 FBXO9Q9UK97 447 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-203ENST00000585752 PLCE1Q9P212 2302 aa16.27■□□□□ 0.19
ATG4D-203ENST00000585752 ZNF99A8MXY4 864 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-203ENST00000585752 TLX2O43763 284 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-203ENST00000585752 ENTPD5O75356 428 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 ERCC1P07992 297 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-203ENST00000585752 CECR9P0C854 216 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 CD79AP11912 226 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 CBR1P16152 277 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 ACADSP16219 412 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 LIMS1P48059 325 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 IDH3GP51553 393 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-203ENST00000585752 RPS6KA3P51812 740 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 NAAAQ02083 359 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 GABPB1Q06547 395 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-203ENST00000585752 CD47Q08722 323 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 TSPAN31Q12999 210 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 MICAQ29983 383 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 PGBD2Q6P3X8 592 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 SMARCD3Q6STE5 483 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 ZER1Q7Z7L7 766 aa16.26■□□□□ 0.19
ATG4D-203ENST00000585752 AQP11Q8NBQ7 271 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms