RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 OR4D10Q8NGI6 311 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PTPMT1Q8WUK0 201 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GPR27Q9NS67 375 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ATPIF1Q9UII2 106 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 KCNG2Q9UJ96 466 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TDRD6O60522 2096 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ACSM4P0C7M7 580 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CSF2RBP32927 897 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 GABRA4P48169 554 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 POU3F4P49335 361 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 BIVMQ86UB2 503 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
CDK5RAP3-237ENST00000585163 KNL1Q8NG31 2342 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 S100A11P31949 105 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MAZP56270 477 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 BIKQ13323 160 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TSEN15Q8WW01 171 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ELF4Q99607 663 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 REG4Q9BYZ8 158 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 LAT2Q9GZY6 243 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CDV3Q9UKY7 258 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SPTBN5Q9NRC6 3674 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ARPC4-TTLL3A0A0A6YYG9 625 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RLN1P04808 185 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 AKAIN1P0CW23 69 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CAPZBP47756 277 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GUCA2AQ02747 115 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C2orf68Q2NKX9 166 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 YOD1Q5VVQ6 348 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 NKAIN2Q5VXU1 208 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 B3GNTL1Q67FW5 361 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ATOH1Q92858 354 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC46A1Q96NT5 459 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OR8B4Q96RC9 309 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ADOQ96SZ5 270 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RTN4RQ9BZR6 473 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ELOVL3Q9HB03 270 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MED9Q9NWA0 146 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CLEC1BQ9P126 229 aa12.83□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TRAV18A0A075B6X5 111 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MFSD2BA6NFX1 497 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CHURC1-FNTBB4DL54 471 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 H0YIG0 161 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC17A2O00624 439 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ARPC5O15511 151 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CDC40O60508 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KDM4BO94953 1096 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 BGLAPP02818 100 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CD1CP29017 333 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CCKBRP32239 447 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC6A8P48029 635 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FNTBP49356 437 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CCR5P51681 352 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ZNF117Q03924 483 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KCNAB1Q14722 419 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC17A1Q14916 467 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MEP1BQ16820 701 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C2orf76Q3KRA6 126 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KIAA0895LQ68EN5 471 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MUC20Q8N307 709 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FAM3DQ96BQ1 224 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 LRRC61Q9BV99 259 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC17A5Q9NRA2 495 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SDHAF2Q9NX18 166 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 WBP1LQ9NX94 342 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PLCL2Q9UPR0 1127 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MYO9BQ13459 2157 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ALPK2Q86TB3 2170 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 LOC100289279A0A1B0GTE1 492 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FRG2CA6NGY1 282 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TTLL8A6PVC2 850 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 XKRYO14609 159 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SIX6O95475 246 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 NMBP08949 121 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GTF2F2P13984 249 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 EN2P19622 333 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 POU3F2P20265 443 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PRSS3P35030 304 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RORAP35398 523 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 BLKP51451 505 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OC90Q02509 493 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SSBP1Q04837 148 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 BAMBIQ13145 260 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RAB11BQ15907 218 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TEX30Q5JUR7 227 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ASPHD2Q6ICH7 369 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FAM166AQ6J272 317 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RGS7BPQ6MZT1 257 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TMUB2Q71RG4 321 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ZNF679Q8IYX0 411 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CLEC1AQ8NC01 280 aa12.82□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GALNT11Q8NCW6 608 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms