RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 LUZP2Q86TE4 346 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 LIX1LQ8IVB5 337 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 GID4Q8IVV7 300 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 ENTHD1Q8IYW4 607 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 FAM26EQ8N5C1 309 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 PROKR2Q8NFJ6 384 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 OR9Q1Q8NGQ5 310 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 CA5BP1Q8WTZ4 195 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 NSMAFQ92636 917 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 NMD3Q96D46 503 aaKnown RBP16.15■□□□□ 0.18
RFFL-211ENST00000584541 LRRC46Q96FV0 321 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 Q96MT0 163 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 MED20Q9H944 212 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 CLN6Q9NWW5 311 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 ZNF226Q9NYT6 803 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 B9D1Q9UPM9 204 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 SNTNA6NMZ2 147 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 PRODHO43272 600 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 GNAO1P09471 354 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 CTLA4P16410 223 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 SPI1P17947 270 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 MPGP29372 298 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 CENPAP49450 140 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 SH3BGRP55822 239 aaPredicted RBP16.14■□□□□ 0.17
RFFL-211ENST00000584541 TGFBR3Q03167 851 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 CEACAM16Q2WEN9 425 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 KLHL12Q53G59 568 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 NXNL2Q5VZ03 156 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 XKRXQ6PP77 449 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 USP51Q70EK9 711 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 ZBTB46Q86UZ6 589 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 OR6V1Q8N148 313 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 RELL2Q8NC24 303 aaPredicted RBP16.14■□□□□ 0.17
RFFL-211ENST00000584541 PTP4A1Q93096 173 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 RFKQ969G6 155 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 UBE2FQ969M7 185 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 TSSK2Q96PF2 358 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 ANKRD60Q9BZ19 345 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 NMNAT2Q9BZQ4 307 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 RACGAP1Q9H0H5 632 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 OR51V1Q9H2C8 321 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 TAS2R16Q9NYV7 291 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 MOKQ9UQ07 419 aa16.14■□□□□ 0.17
RFFL-211ENST00000584541 A0A1W2PPL8 197 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 A8MXE2 369 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 AGAP20933 346 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 MYF6P23409 242 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 ASCL1P50553 236 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 BLVRAP53004 296 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 RPS7P62081 194 aaKnown RBP16.13■□□□□ 0.17
RFFL-211ENST00000584541 GLO1Q04760 184 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 MAD2L1BPQ15013 274 aaPredicted RBP16.13■□□□□ 0.17
RFFL-211ENST00000584541 P2RY6Q15077 328 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 OCLNQ16625 522 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 SLC35D3Q5M8T2 416 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 SLC25A30Q5SVS4 291 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 LCN1P1Q5VSP4 162 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 LINGO2Q7L985 606 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 THAP5Q7Z6K1 395 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 GLB1L2Q8IW92 636 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 LILRB4Q8NHJ6 448 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 RHOXF1Q8NHV9 184 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 ELOVL5Q9NYP7 299 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 JKAMPQ9P055 326 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 NBASA2RRP1 2371 aa16.13■□□□□ 0.17
RFFL-211ENST00000584541 IGLV1-36A0A0B4J1U3 117 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 IGKV1D-43A0A0B4J1Z2 117 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 CIB4A0PJX0 185 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 FAM90A27PA6NNH2 459 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 ZNF99A8MXY4 864 aaPredicted RBP16.12■□□□□ 0.17
RFFL-211ENST00000584541 DCTN6O00399 190 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 GYPBP06028 91 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 CLUP10909 449 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 PYCR1P32322 319 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 ISL1P61371 349 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 APOFQ13790 326 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 ETFDHQ16134 617 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 C9orf135Q5VTT2 229 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 AADACL4Q5VUY2 407 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 KRT80Q6KB66 452 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 GABRG1Q8N1C3 465 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 ZNF808Q8N4W9 903 aaPredicted RBP16.12■□□□□ 0.17
RFFL-211ENST00000584541 OR6K6Q8NGW6 343 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 CNBD2Q96M20 576 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 FOXB1Q99853 325 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 HCAR1Q9BXC0 346 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 SEC61A2Q9H9S3 476 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 DNAJC27Q9NZQ0 273 aa16.12■□□□□ 0.17
RFFL-211ENST00000584541 COA3Q9Y2R0 106 aaPredicted RBP16.12■□□□□ 0.17
RFFL-211ENST00000584541 SLC22A31A6NKX4 558 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 FAM171A2A8MVW0 826 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 PYCARD-AS1I3L0S3 204 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 ZG16O60844 167 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 GLCEO94923 617 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 HLA-DQA2P01906 255 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 PLA2G2AP14555 144 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 GABRB1P18505 474 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 NPR2P20594 1047 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 COX5AP20674 150 aa16.11■□□□□ 0.17
RFFL-211ENST00000584541 IGHV1-2P23083 117 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms