RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ZNF160Q9HCG1 818 aa5.33□□□□□ -1.56
RTTN-209ENST00000583043 LTB4R2Q9NPC1 389 aa5.33□□□□□ -1.56
RTTN-209ENST00000583043 CACFD1Q9UGQ2 172 aa5.33□□□□□ -1.56
RTTN-209ENST00000583043 MBD1Q9UIS9 605 aaPredicted RBP5.33□□□□□ -1.56
RTTN-209ENST00000583043 B9D1Q9UPM9 204 aa5.33□□□□□ -1.56
RTTN-209ENST00000583043 SPEF1Q9Y4P9 236 aa5.33□□□□□ -1.56
RTTN-209ENST00000583043 NEUROG3Q9Y4Z2 214 aa5.33□□□□□ -1.56
RTTN-209ENST00000583043 TRBV11-1A0A0K0K1C0 115 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 VAMP2P63027 116 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 GABREP78334 506 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ATG4DQ86TL0 474 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 SGPP2Q8IWX5 399 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 C10orf111Q8N326 155 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PRSS35Q8N3Z0 413 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 SIRT6Q8N6T7 355 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ZDHHC22Q8N966 263 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 OR5L1Q8NGL2 311 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ARL11Q969Q4 196 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PBDC1Q9BVG4 233 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 GSX2Q9BZM3 304 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 CHIAQ9BZP6 476 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 WWTR1Q9GZV5 400 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 SLC25A32Q9H2D1 315 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 SLC22A11Q9NSA0 550 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 YARS2Q9Y2Z4 477 aaKnown RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 C7orf66A4D0T2 115 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PIAS2O75928 621 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 SERPINA5P05154 406 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 CTXN2P0C2S0 81 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 EVI2BP34910 448 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 POU3F1Q03052 451 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 FDX2Q6P4F2 183 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 OR52H1Q8NGJ2 320 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 OR8D4Q8NGM9 314 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 STOML3Q8TAV4 291 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 CHST6Q9GZX3 395 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 SPACA1Q9HBV2 294 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 MCCC2Q9HCC0 563 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 RANGRFQ9HD47 186 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 MCTS1Q9ULC4 181 aaKnown RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 SLC22A23A1A5C7 686 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PTH2RP49190 550 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 EMDP50402 254 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 GRK1Q15835 563 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 NNATQ16517 81 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ACKR1Q16570 336 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 SGCAQ16586 387 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 FHL5Q5TD97 284 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ANKRD16Q6P6B7 361 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 DPY19L4Q7Z388 723 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 NEK7Q8TDX7 302 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PP6455Q8WZ26 134 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 BORCS8Q96FH0 119 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 DCLRE1CQ96SD1 692 aaKnown RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 UBE2ZQ9H832 354 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 LHX9Q9NQ69 397 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 IL20RAQ9UHF4 553 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PRELID1Q9Y255 219 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 MEIKINA0A087WXM9 373 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 A0A1W2PQF6 199 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 WDPCPO95876 746 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 TPOP07202 933 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 S100A11P31949 105 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 CX3CR1P49238 355 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 LIMK1P53667 647 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 HSF1Q00613 529 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 OPCMLQ14982 345 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 FCN2Q15485 313 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 SURF2Q15527 256 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 VASNQ6EMK4 673 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 RHBDD2Q6NTF9 364 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 CPEB2Q7Z5Q1 589 aaKnown RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 TMED4Q7Z7H5 227 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 HMGN2P46Q86SG4 172 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ELMOD2Q8IZ81 293 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 BPIFB2Q8N4F0 458 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PMEPA1Q969W9 287 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PELI1Q96FA3 418 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ELMOD3Q96FG2 381 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ELF4Q99607 663 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 RIMS4Q9H426 269 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 KLHL13Q9P2N7 655 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 TBC1D24Q9ULP9 559 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 KCNE3Q9Y6H6 103 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 F5H0A9 414 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 TSPAN9O75954 239 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ANKRD34CP0C6C1 535 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 MSR1P21757 451 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 PSMB10P40306 273 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 POU3F4P49335 361 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ZNF542PQ5EBM4 170 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 OR5T3Q8NGG3 340 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 HGDQ93099 445 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 C4orf45Q96LM5 186 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ZNF471Q9BX82 626 aaPredicted RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 TPSD1Q9BZJ3 242 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 CCDC86Q9H6F5 360 aaKnown RBP5.32□□□□□ -1.56
RTTN-209ENST00000583043 SERGEFQ9UGK8 458 aa5.32□□□□□ -1.56
RTTN-209ENST00000583043 ZNF346Q9UL40 294 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms