RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 KCTD18Q6PI47 426 aaPredicted RBP20.33■□□□□ 0.85
CCDC47-204ENST00000582252 CCBE1Q6UXH8 406 aaPredicted RBP20.33■□□□□ 0.85
CCDC47-204ENST00000582252 SLC35D2Q76EJ3 337 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 GDPD3Q7L5L3 318 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 PLCZ1Q86YW0 608 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 ZNF454Q8N9F8 522 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 NSMAFQ92636 917 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.33■□□□□ 0.85
CCDC47-204ENST00000582252 CCDC86Q9H6F5 360 aaKnown RBP20.33■□□□□ 0.85
CCDC47-204ENST00000582252 ZNF160Q9HCG1 818 aa20.33■□□□□ 0.85
CCDC47-204ENST00000582252 PRR32B1ATL7 298 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 ZNF593O00488 134 aaPredicted RBP20.33■□□□□ 0.84
CCDC47-204ENST00000582252 SLC2A2P11168 524 aaPredicted RBP20.33■□□□□ 0.84
CCDC47-204ENST00000582252 GABREP78334 506 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 TMPRSS7Q7RTY8 843 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 HDDC2Q7Z4H3 204 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 RPS19BP1Q86WX3 136 aaKnown RBP20.33■□□□□ 0.84
CCDC47-204ENST00000582252 C19orf18Q8NEA5 215 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 SLC22A4Q9H015 551 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 SLITRK2Q9H156 845 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 ZCCHC4Q9H5U6 513 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 CDCP1Q9H5V8 836 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 PPP1R3EQ9H7J1 279 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 EXTL2Q9UBQ6 330 aa20.33■□□□□ 0.84
CCDC47-204ENST00000582252 RPH3AQ9Y2J0 694 aaPredicted RBP20.33■□□□□ 0.84
CCDC47-204ENST00000582252 TMEM212A6NML5 194 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 ZFPL1O95159 310 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 CELA2AP08217 269 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 IFNGR1P15260 489 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 CTLA4P16410 223 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 APEX1P27695 318 aaKnown RBP20.32■□□□□ 0.84
CCDC47-204ENST00000582252 RBMS1P29558 406 aaKnown RBP20.32■□□□□ 0.84
CCDC47-204ENST00000582252 THBS2P35442 1172 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 OR10A3P58181 314 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 NANOS3P60323 173 aaKnown RBP20.32■□□□□ 0.84
CCDC47-204ENST00000582252 POU3F1Q03052 451 aaPredicted RBP20.32■□□□□ 0.84
CCDC47-204ENST00000582252 MYBPHQ13203 477 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 CADM3Q8N126 398 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 Q8N402 240 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 TMEM156Q8N614 296 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 TRMT10AQ8TBZ6 339 aaKnown RBP20.32■□□□□ 0.84
CCDC47-204ENST00000582252 OR8B4Q96RC9 309 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 NEURL2Q9BR09 285 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 ANGPTL4Q9BY76 406 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 CYSLTR2Q9NS75 346 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 KCNG2Q9UJ96 466 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 FBXL2Q9UKC9 423 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 HDGFL3Q9Y3E1 203 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 HRH3Q9Y5N1 445 aa20.32■□□□□ 0.84
CCDC47-204ENST00000582252 TCN2P20062 427 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 CD82P27701 267 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 MLF1P58340 268 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 ADAM8P78325 824 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 Q499Y3 187 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 ARMC10Q8N2F6 343 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 WDSUB1Q8N9V3 476 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 FAM117AQ9C073 453 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 NOX4Q9NPH5 578 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 HPF1Q9NWY4 346 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 TCFL5Q9UL49 500 aa20.31■□□□□ 0.84
CCDC47-204ENST00000582252 SHISA8B8ZZ34 492 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 STMND1H3BQB6 276 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 HLA-DQB1P01920 261 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 SPARCP09486 303 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 HLA-DOBP13765 273 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 ZNF823P16415 610 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 ELK1P19419 428 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 SRMP19623 302 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 NPR2P20594 1047 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 SSPNQ14714 243 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 PRAMEF20Q5VT98 475 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 SLC22A10Q63ZE4 541 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 FDX2Q6P4F2 183 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 ZNF679Q8IYX0 411 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 SAMD12Q8N8I0 201 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 PAQR8Q8TEZ7 354 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 CT55Q8WUE5 264 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 KCNK17Q96T54 332 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 TSPAN10Q9H1Z9 355 aaPredicted RBP20.3■□□□□ 0.84
CCDC47-204ENST00000582252 DLL3Q9NYJ7 618 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 EFNA2O43921 213 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 KHDRBS3O75525 346 aaKnown RBP20.3■□□□□ 0.84
CCDC47-204ENST00000582252 EPXP11678 715 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 SPNP16150 400 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 SDHBP21912 280 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 INPP1P49441 399 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 UEVLDQ8IX04 471 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 KDM8Q8N371 416 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 ZNF676Q8N7Q3 588 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 OR2G2Q8NGZ5 317 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 RELTQ969Z4 430 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 RNF166Q96A37 237 aaPredicted RBP20.3■□□□□ 0.84
CCDC47-204ENST00000582252 MAP6Q96JE9 813 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 CMTM3Q96MX0 182 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 DCBLD2Q96PD2 775 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 DERL3Q96Q80 235 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 MRI1Q9BV20 369 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 MRPL22Q9NWU5 206 aaKnown RBP20.3■□□□□ 0.84
CCDC47-204ENST00000582252 FRRS1LQ9P0K9 344 aa20.3■□□□□ 0.84
CCDC47-204ENST00000582252 MALT1Q9UDY8 824 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms