RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OR6V1Q8N148 313 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 KDM8Q8N371 416 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 TEX19Q8NA77 164 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 SYT14Q8NB59 555 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 ADPRHL1Q8NDY3 354 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 NEIL3Q8TAT5 605 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 POC1BQ8TC44 478 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 FNDC8Q8TC99 324 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 TM9SF4Q92544 642 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 SFXN2Q96NB2 322 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 DDOQ99489 341 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 SH3GL3Q99963 347 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 FAM173AQ9BQD7 235 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 MED18Q9BUE0 208 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 TTTY10Q9BZA0 68 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 COMMD4Q9H0A8 199 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 PALMDQ9NP74 551 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 VSX1Q9NZR4 365 aaPredicted RBP8.33□□□□□ -1.08
SS18-220ENST00000582092 B9D1Q9UPM9 204 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 RASD1Q9Y272 281 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 TNRC6AQ8NDV7 1962 aaKnown RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 A0A075B6Q4 140 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 SLC22A23A1A5C7 686 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ARGFXA6NJG6 315 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 NPIPB13A6NJU9 1138 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ZNF879B4DU55 563 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 NPIPB4C9JG80 1138 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 KLRC4-KLRK1H3BQV0 150 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 LINC01387J3KSC0 135 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 CDK2AP1O14519 115 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 PLPP2O43688 288 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 GPRIN2O60269 458 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ARL6IP5O75915 188 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ZNF432O94892 652 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 RPP14O95059 124 aaKnown RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 VAMP5O95183 116 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 IGHG1P01857 330 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 SPARCP09486 303 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 PLA2G2AP14555 144 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 CD46P15529 392 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 SDC2P34741 201 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 RPS19P39019 145 aaKnown RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 GDI2P50395 445 aaKnown RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 CCL11P51671 97 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ADAM8P78325 824 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 FABP5Q01469 135 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ZNF45Q02386 682 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 EGR3Q06889 387 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 THEM4Q5T1C6 240 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 AGAP7PQ5VUJ5 663 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 LINC00696Q6ZRV3 163 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ASB18Q6ZVZ8 466 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 MDGA2Q7Z553 956 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 CEACAM19Q7Z692 300 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 LSRQ86X29 649 aaPredicted RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ABHD4Q8TB40 342 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ZNF519Q8TB69 540 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ZPLD1Q8TCW7 415 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 SMAP2Q8WU79 429 aaPredicted RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 ASB10Q8WXI3 467 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 NSMAFQ92636 917 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 PNPLA2Q96AD5 504 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 AGAP4Q96P64 663 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 MROQ9BYG7 248 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 SLIRPQ9GZT3 109 aaKnown RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.32□□□□□ -1.08
SS18-220ENST00000582092 SLITRK2Q9H156 845 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 ZNF71Q9NQZ8 489 aaPredicted RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 POLR1DQ9Y2S0 133 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 PCDHGA9Q9Y5G4 932 aaKnown RBP8.32□□□□□ -1.08
SS18-220ENST00000582092 DOCK10Q96BY6 2186 aa8.32□□□□□ -1.08
SS18-220ENST00000582092 EXPH5Q8NEV8 1989 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 MPDZO75970 2070 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 A0A1W2PNV4 684 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 A0A1W2PPL8 197 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 OR2M5A3KFT3 312 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 A6NL46 340 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 AQP7P3A6NL99 342 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 HSPB2A8KAH6 182 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 LOC110117498-PIK3R3F6TDL0 507 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 PDCD5O14737 125 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 OGG1O15527 345 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 EFNA2O43921 213 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 SULT1C4O75897 302 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 F10P00742 488 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 TFP02787 698 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 POU3F2P20265 443 aaPredicted RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 IL11P20809 199 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 CFL1P23528 166 aaKnown RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 CD96P40200 585 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 PSMB10P40306 273 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 CARD18P57730 90 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 GPR85P60893 370 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 HNRNPA0Q13151 305 aaKnown RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 EIF2B1Q14232 305 aaKnown RBP8.31□□□□□ -1.08
SS18-220ENST00000582092 TAF13Q15543 124 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 OR1C1Q15619 314 aa8.31□□□□□ -1.08
SS18-220ENST00000582092 HSPB2Q16082 182 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms