RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 B3GNT4Q9C0J1 378 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RNF32Q9H0A6 362 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NANSQ9NR45 359 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 LRFN1Q9P244 771 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CHRNA9Q9UGM1 479 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF337Q9Y3M9 751 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ACACAQ13085 2346 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 EXPH5Q8NEV8 1989 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CACNA1GO43497 2377 aa11.41□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RGS9O75916 674 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 OR7A10O76100 309 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RFPL3SP0C7P2 107 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SLC2A5P22732 501 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MYL9P24844 172 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CD82P27701 267 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GRPRP30550 384 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 POLR2HP52434 150 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SCN1BQ07699 218 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ACSM1Q08AH1 577 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RDH10Q8IZV5 341 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 Q8N402 240 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 LILRB2Q8N423 598 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ATF6BQ99941 703 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MED18Q9BUE0 208 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 KCNN2Q9H2S1 579 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ASB6Q9NWX5 421 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SLC25A12O75746 678 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 DXOO77932 396 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PAHP00439 452 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SHC1P29353 583 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CCL11P51671 97 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZNF85Q03923 595 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 AIMP2Q13155 320 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PLPPR5Q32ZL2 321 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RNASE12Q5GAN4 147 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 IDNKQ5T6J7 187 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ABHD17BQ5VST6 288 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PLCZ1Q86YW0 608 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GALNT16Q8N428 558 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ZPLD1Q8TCW7 415 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GIMAP1Q8WWP7 306 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PTDSS2Q9BVG9 487 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 JAM3Q9BX67 310 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ANGPTL4Q9BY76 406 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CSAG2Q9Y5P2 127 aa11.4□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 A0A0B4J203 849 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TEX13CA0A0J9YWL9 993 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LOC105371267A0A1B0GV96 52 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 A0A1W2PRG6 482 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TMEM127O75204 238 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NEURL1O76050 574 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PSKH1P11801 424 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF41P51814 821 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RTP5Q14D33 572 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PON3Q15166 354 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SLC6A19Q695T7 634 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LYPD4Q6UWN0 246 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR5J2Q8NH18 312 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZFAND1Q8TCF1 268 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ORAI1Q96D31 301 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CITED4Q96RK1 184 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CNN2Q99439 309 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 COQ7Q99807 217 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GON7Q9BXV9 100 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SDHAF3Q9NRP4 125 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NLKQ9UBE8 527 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 C11orf98E9PRG8 122 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PSMD9O00233 223 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF780AO75290 641 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 P04436 131 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TFPIP10646 304 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SLC2A2P11168 524 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SFTPDP35247 375 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LEG1Q6P5S2 330 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DPY19L2P2Q6ZN68 376 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GPALPP1Q8IXQ4 340 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ELMOD2Q8IZ81 293 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SNX33Q8WV41 574 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FER1L6-AS2Q96M78 137 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 Q96M85 177 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TMEM43Q9BTV4 400 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 INPP5EQ9NRR6 644 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 KLHL21Q9UJP4 597 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 IGF2RP11717 2491 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ANKRD11Q6UB99 2663 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 A0A1W2PNR3 127 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR6C68A6NDL8 312 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LANCL1O43813 399 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SELENOFO60613 162 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TFP02787 698 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ACTC1P68032 377 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ACTA1P68133 377 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LGALS3BPQ08380 585 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 POU4F2Q12837 409 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 C1orf140Q5VVS0 124 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MTFR2Q6P444 385 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 XKRXQ6PP77 449 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FIP1L1Q6UN15 594 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms