RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 GYG2O15488 501 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 NDUFB2O95178 105 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 RAB36O95755 333 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 CD14P08571 375 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 PRSS57Q6UWY2 283 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 SKA3Q8IX90 412 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 MUC15Q8N387 334 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 IL17RDQ8NFM7 739 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 ZNF519Q8TB69 540 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 NMD3Q96D46 503 aaKnown RBP20.79■□□□□ 0.92
LIMD2-207ENST00000579329 TRMT61AQ96FX7 289 aaKnown RBP20.79■□□□□ 0.92
LIMD2-207ENST00000579329 LRGUKQ96M69 825 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 NOX3Q9HBY0 568 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 CBLN4Q9NTU7 201 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 ZNF224Q9NZL3 707 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 FBXL3Q9UKT7 428 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 TMCC3Q9ULS5 477 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 SIGLEC7Q9Y286 467 aa20.79■□□□□ 0.92
LIMD2-207ENST00000579329 DNHD1Q96M86 4753 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 UNC119BA6NIH7 251 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 PTP4A3O75365 173 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 SLC2A10O95528 541 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 CD8AP01732 235 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 ZNF26P17031 533 aaPredicted RBP20.78■□□□□ 0.92
LIMD2-207ENST00000579329 MAGEA2P43356 314 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 ATP5J2P56134 94 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 RAB1AP62820 205 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 ERVK-25P63136 954 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 PIGFQ07326 219 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 DPPA2Q7Z7J5 298 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 MYPOPQ86VE0 399 aaPredicted RBP20.78■□□□□ 0.92
LIMD2-207ENST00000579329 ARIH2OSQ8N7S6 290 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 OR4F15Q8NGB8 312 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 RBP7Q96R05 134 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 TRIM15Q9C019 465 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 GRHPRQ9UBQ7 328 aa20.78■□□□□ 0.92
LIMD2-207ENST00000579329 FLNAP21333 2647 aaKnown RBP20.78■□□□□ 0.92
LIMD2-207ENST00000579329 HEATR1Q9H583 2144 aaKnown RBP20.78■□□□□ 0.92
LIMD2-207ENST00000579329 MGRN1O60291 552 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 OR10H3O60404 316 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 KRT36O76013 467 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 CALCRP30988 508 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 APOBEC3AP31941 199 aaPredicted RBP20.77■□□□□ 0.92
LIMD2-207ENST00000579329 IFNGR2P38484 337 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 CDKN1AP38936 164 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 GIPRP48546 466 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 PTDSS1P48651 473 aaKnown RBP20.77■□□□□ 0.92
LIMD2-207ENST00000579329 CHRNB3Q05901 458 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 FMODQ06828 376 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 TRAP1Q12931 704 aaKnown RBP20.77■□□□□ 0.92
LIMD2-207ENST00000579329 FAM98BQ52LJ0 330 aaKnown RBP20.77■□□□□ 0.92
LIMD2-207ENST00000579329 THEM4Q5T1C6 240 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 YTHDF3Q7Z739 585 aaKnown RBP20.77■□□□□ 0.92
LIMD2-207ENST00000579329 ZER1Q7Z7L7 766 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 ADAM18Q9Y3Q7 739 aa20.77■□□□□ 0.92
LIMD2-207ENST00000579329 IGHV2OR16-5A0A0B4J2B6 119 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 ZNF14P17017 642 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-207ENST00000579329 MRPS34P82930 218 aaKnown RBP20.76■□□□□ 0.91
LIMD2-207ENST00000579329 C11orf71Q6IPW1 123 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 SLC25A47Q6Q0C1 308 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 SLC16A14Q7RTX9 510 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 NSMAFQ92636 917 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 SLC7A6OSQ96CW6 309 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-207ENST00000579329 ZNF75AQ96N20 296 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 ZNF570Q96NI8 536 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 GPX7Q96SL4 187 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-207ENST00000579329 SH3GL3Q99963 347 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 VPS13CQ709C8 3753 aa20.76■□□□□ 0.91
LIMD2-207ENST00000579329 IGKV1D-43A0A0B4J1Z2 117 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 XKRYO14609 159 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 ACOT8O14734 319 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 NPR2P20594 1047 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 FPR3P25089 353 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 SLC36A2Q495M3 483 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 GPR139Q6DWJ6 353 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 TMEM53Q6P2H8 277 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 FAM122BQ7Z309 247 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 NUP37Q8NFH4 326 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 FGFBP3Q8TAT2 258 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 HTRA1Q92743 480 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 Q96M85 177 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 GPA33Q99795 319 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 BTBD10Q9BSF8 475 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 RNF121Q9H920 327 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 NRIP3Q9NQ35 241 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 CA10Q9NS85 328 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 UGT2A1Q9Y4X1 527 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 LYVE1Q9Y5Y7 322 aa20.75■□□□□ 0.91
LIMD2-207ENST00000579329 TNFRSF11BO00300 401 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 PATE4P0C8F1 98 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 HMGA2P52926 109 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 HGFACQ04756 655 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 MESTQ5EB52 335 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 SMARCD3Q6STE5 483 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 THSD4Q6ZMP0 1018 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 DPY19L2P2Q6ZN68 376 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 CLDN22Q8N7P3 220 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 FANK1Q8TC84 345 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 GNPDA2Q8TDQ7 276 aa20.74■□□□□ 0.91
LIMD2-207ENST00000579329 MS4A3Q96HJ5 214 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms