RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 TREML1Q86YW5 311 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 KDM8Q8N371 416 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 POP5Q969H6 163 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 SLC25A44Q96H78 314 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 SEPHS2Q99611 448 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 GPA33Q99795 319 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 ARHGDIGQ99819 225 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 SYT3Q9BQG1 590 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 KCNK9Q9NPC2 374 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 IQCMA0A1B0GVH7 501 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 WIPF1O43516 503 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 ICMTO60725 284 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 IGHV3-13P01766 116 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 IGHV2-5P01817 119 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 GPX2P18283 190 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 ALDH3B1P43353 468 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 GIPRP48546 466 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF84P51523 738 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 PLP2Q04941 152 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 NXNQ6DKJ4 435 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 SLC30A7Q8NEW0 376 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 FNDC8Q8TC99 324 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 CCDC28BQ9BUN5 200 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 WDR55Q9H6Y2 383 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 SMURF2Q9HAU4 748 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 TAAR3PQ9P1P4 343 aa9.6□□□□□ -0.87
SMARCE1-214ENST00000578112 SH3PXD2BA1X283 911 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 DHHO43323 396 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 B4GALT1P15291 398 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 RAB39AQ14964 217 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 OCLNQ16625 522 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 ZCCHC24Q8N2G6 241 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF566Q969W8 418 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 TMPRSS13Q9BYE2 586 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 KCNN2Q9H2S1 579 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 SEC14L4Q9UDX3 406 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 TRIM33Q9UPN9 1127 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 PRELID1Q9Y255 219 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 TRBV5-3A0A0A0MS03 114 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 IGHV1-69-2A0A0G2JMI3 117 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 EVPLLA8MZ36 301 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 CD55P08174 381 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 SLC6A2P23975 617 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 RANBP1P43487 201 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 SCARB2Q14108 478 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 HIST3H3Q16695 136 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 GTDC1Q4AE62 458 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 C10orf128Q5T292 105 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 SLC35D2Q76EJ3 337 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 ZNF584Q8IVC4 421 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 SKA3Q8IX90 412 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 NFKBIDQ8NI38 313 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 RASSF5Q8WWW0 418 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 PCDHAC1Q9H158 963 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 TREM2Q9NZC2 230 aa9.59□□□□□ -0.87
SMARCE1-214ENST00000578112 IFNL4K9M1U5 179 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 FOXH1O75593 365 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 NCR1O76036 304 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 IGHG1P01857 330 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 EGR1P18146 543 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 AHCYP23526 432 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 BIDP55957 195 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 MPP2Q14168 576 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 NPTX1Q15818 432 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 ZNF74Q16587 644 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 HFEQ30201 348 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 MBNL2Q5VZF2 373 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 CARD17Q5XLA6 110 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 TTC33Q6PID6 262 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 BLOC1S3Q6QNY0 202 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 ZER1Q7Z7L7 766 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 ARMC8Q8IUR7 673 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 BPIFB2Q8N4F0 458 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 MS4A3Q96HJ5 214 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 EGLN1Q9GZT9 426 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 DECR2Q9NUI1 292 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 LYNX1G3V0Z9 82 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 MPZL1O95297 269 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 PGA4P0DJD7 388 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 PGA3P0DJD8 388 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 ADORA3P0DMS8 318 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 LYNX1P0DP58 116 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 HKR1P10072 659 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 SEC24CP53992 1094 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 UCP2P55851 309 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 CEP85LQ5SZL2 805 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 EPGNQ6UW88 154 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 DOK3Q7L591 496 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 TXNDC15Q96J42 360 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 ZNF426Q9BUY5 554 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 MED29Q9NX70 200 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 NKIRAS1Q9NYS0 192 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 ZDHHC8Q9ULC8 765 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 TANC2Q9HCD6 1990 aa9.58□□□□□ -0.88
SMARCE1-214ENST00000578112 POM121CA8CG34 1229 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 CLDN34H7C241 214 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 PLPP2O43688 288 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms