RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 LRRC8AQ8IWT6 810 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ZNF683Q8IZ20 524 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 SNX31Q8N9S9 440 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 OSTF1Q92882 214 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 CEP19Q96LK0 163 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 PANX1Q96RD7 426 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 RIT2Q99578 217 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 KIR2DL4Q99706 377 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 NPAS2Q99743 824 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ELOVL4Q9GZR5 314 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 MFFQ9GZY8 342 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 MRPL47Q9HD33 250 aaKnown RBP3.64□□□□□ -1.83
NUP88-213ENST00000576862 C8orf4Q9NR00 106 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 YAE1D1Q9NRH1 226 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 TUBG2Q9NRH3 451 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ELOVL2Q9NXB9 296 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 SLC2A8Q9NY64 477 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ADAM22Q9P0K1 906 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 DPM3Q9P2X0 92 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 SLC7A8Q9UHI5 535 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ENPP5Q9UJA9 477 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 PIGLQ9Y2B2 252 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 SAMHD1Q9Y3Z3 626 aaKnown RBP3.64□□□□□ -1.83
NUP88-213ENST00000576862 FOCADQ5VW36 1801 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 FER1L6Q2WGJ9 1857 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 CDK5RAP2Q96SN8 1893 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 ASTN1O14525 1302 aa3.64□□□□□ -1.83
NUP88-213ENST00000576862 BAZ2BQ9UIF8 2168 aaKnown RBP3.63□□□□□ -1.83
NUP88-213ENST00000576862 GOLGA8QA0A0J9YX86 632 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 USP27XA6NNY8 438 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 WASHC1A8K0Z3 465 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 PDXKO00764 312 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 GPR171O14626 319 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 OR4F21O95013 312 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 GNSP15586 552 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 IGHV1-2P23083 117 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 CFL1P23528 166 aaKnown RBP3.63□□□□□ -1.83
NUP88-213ENST00000576862 FDFT1P37268 417 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 SLC26A2P50443 739 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 EMP2P54851 167 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 CNTN2Q02246 1040 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 PIGHQ14442 188 aaPredicted RBP3.63□□□□□ -1.83
NUP88-213ENST00000576862 SPCS2Q15005 226 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 ZSWIM7Q19AV6 140 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 ADPRMQ3LIE5 342 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 ZCWPW2Q504Y3 356 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 XKR4Q5GH76 650 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 CLVS2Q5SYC1 327 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 LGSNQ5TDP6 509 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 IL23RQ5VWK5 629 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 WSCD1Q658N2 575 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 TMEM53Q6P2H8 277 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 SCYL2Q6P3W7 929 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 NIPAL3Q6P499 406 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 CBLN3Q6UW01 205 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 WASH2PQ6VEQ5 465 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 ERICH1Q86X53 443 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 CCDC36Q8IYA8 594 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 LRRC17Q8N6Y2 441 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 ZNF680Q8NEM1 530 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 TEX47Q8TBZ9 253 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 PHYHIPQ92561 330 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 PINX1Q96BK5 328 aaKnown RBP3.63□□□□□ -1.83
NUP88-213ENST00000576862 SLC25A36Q96CQ1 311 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 PLEKHA8Q96JA3 519 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 TSNARE1Q96NA8 513 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 LXNQ9BS40 222 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 TEKT3Q9BXF9 490 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 NDEL1Q9GZM8 345 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 RAB1BQ9H0U4 201 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 GAL3ST2Q9H3Q3 398 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 DHX33Q9H6R0 707 aaKnown RBP3.63□□□□□ -1.83
NUP88-213ENST00000576862 POLD4Q9HCU8 107 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 MEPEQ9NQ76 525 aaPredicted RBP3.63□□□□□ -1.83
NUP88-213ENST00000576862 PXMP2Q9NR77 195 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 KLRF1Q9NZS2 232 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 KLHL21Q9UJP4 597 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 PSMD13Q9UNM6 376 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 OR10H1Q9Y4A9 318 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 MYH1P12882 1939 aa3.63□□□□□ -1.83
NUP88-213ENST00000576862 BRCA1P38398 1863 aaKnown RBP3.62□□□□□ -1.83
NUP88-213ENST00000576862 GOLGB1Q14789 3259 aaKnown RBP3.62□□□□□ -1.83
NUP88-213ENST00000576862 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 TMEM150BA6NC51 233 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 OR6C70A6NIJ9 312 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 GOLGA8KD6RF30 607 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 NPIPA2E9PIF3 369 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 PPIAL4DF5H284 164 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 H3BMH7 237 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 ARPC3O15145 178 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 LATO43561 262 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 DFNA5O60443 496 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 SCN2BO60939 215 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 BCAS1O75363 584 aaPredicted RBP3.62□□□□□ -1.83
NUP88-213ENST00000576862 SEMA3DO95025 777 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 LYPLA2O95372 231 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 NSA2O95478 260 aaKnown RBP3.62□□□□□ -1.83
NUP88-213ENST00000576862 GYPCP04921 128 aa3.62□□□□□ -1.83
NUP88-213ENST00000576862 IL6P05231 212 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms