RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 PTCHD4Q6ZW05 846 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 OTULINQ96BN8 352 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 ZNF837Q96EG3 531 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 MUS81Q96NY9 551 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 PSMG3-AS1Q96PY0 264 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC38A2Q96QD8 506 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 SNX18Q96RF0 628 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 FOXB1Q99853 325 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 PRRG3Q9BZD7 231 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 SYT4Q9H2B2 425 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 SEC61A2Q9H9S3 476 aa12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 ANKHD1Q8IWZ3 2542 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-218ENST00000574964 A0A1W2PPL8 197 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 SH3D21A4FU49 640 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 KHDRBS3O75525 346 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 FARS2O95363 451 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 B4GALT1P15291 398 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 ZNF3P17036 446 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 CRABP1P29762 137 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 CCKARP32238 428 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 CAPZA2P47755 286 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 CDK5Q00535 292 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC34A1Q06495 639 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 NPRL3Q12980 569 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 ZIK1Q3SY52 487 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 TBRG1Q3YBR2 411 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 TIMM23BQ5SRD1 257 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 C10orf128Q5T292 105 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 TMEM236Q5W0B7 351 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 ACSM5Q6NUN0 579 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC25A47Q6Q0C1 308 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 P2RY8Q86VZ1 359 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 DMRTC2Q8IXT2 367 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 GALNT4Q8N4A0 578 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 C17orf78Q8N4C9 275 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 OR52N5Q8NH56 324 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 HSD17B8Q92506 261 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC29A1Q99808 456 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 NUAK2Q9H093 628 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC25A19Q9HC21 320 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 SRA1Q9HD15 236 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 C8orf4Q9NR00 106 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 ZNF226Q9NYT6 803 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 TVP23BQ9NYZ1 205 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 TENM4Q6N022 2769 aa12.74□□□□□ -0.37
NPLOC4-218ENST00000574964 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 A0A1W2PR80 420 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 OR5H1A6NKK0 313 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 WNT11O96014 354 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 CTLA4P16410 223 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 NPR2P20594 1047 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 PAICSP22234 425 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 COL8A1P27658 744 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 PEX2P28328 305 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 CRMP1Q14194 572 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 SNAPC1Q16533 368 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 SGCAQ16586 387 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 HIKESHIQ53FT3 197 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 SSX8Q7RTT4 187 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC37A3Q8NCC5 494 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 NANOS1Q8WY41 292 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 BCL2L2Q92843 193 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 NMD3Q96D46 503 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 DACH2Q96NX9 599 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 SPOCK3Q9BQ16 436 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 KCNN2Q9H2S1 579 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 VCXQ9H320 206 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 FN3KQ9H479 309 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 NGBQ9NPG2 151 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC17A5Q9NRA2 495 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 CMC2Q9NRP2 79 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 TMEM38BQ9NVV0 291 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 NKX1-2Q9UD57 310 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 AMDHD2Q9Y303 409 aa12.73□□□□□ -0.37
NPLOC4-218ENST00000574964 IGKV1D-43A0A0B4J1Z2 117 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 OR6C68A6NDL8 312 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 MGRN1O60291 552 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 OR8G3PP0DMU2 310 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 EPXP11678 715 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 IGFBP2P18065 325 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 PPA1Q15181 289 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 TAB1Q15750 504 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 ETFDHQ16134 617 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 SLX4IPQ5VYV7 408 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 CCDC36Q8IYA8 594 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 SLC22A24Q8N4F4 322 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 NPEPL1Q8NDH3 523 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 FAM222BQ8WU58 562 aa12.72□□□□□ -0.37
NPLOC4-218ENST00000574964 TSSK2Q96PF2 358 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms