RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PAPD4Q6PIY7 484 aaKnown RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 PXKQ7Z7A4 578 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 OR5T3Q8NGG3 340 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 OR2T27Q8NH04 317 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 PHYHIPLQ96FC7 376 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 MYADMQ96S97 322 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 EDEM2Q9BV94 578 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 JAM3Q9BX67 310 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 METTL8Q9H825 291 aaKnown RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 C20orf141Q9NUB4 165 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 MTFP1Q9UDX5 166 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 CSAG2Q9Y5P2 127 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 HEATR5BQ9P2D3 2071 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 MEX3AA1L020 520 aaKnown RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 LINC01565O15544 149 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 MAKP20794 623 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 PRKAR1BP31321 381 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 F2RL1P55085 397 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 EIF5AP63241 154 aaKnown RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF124Q15973 351 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 JMJD6Q6NYC1 403 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 FAM24BQ8N5W8 94 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 CDS1Q92903 461 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 FGF13Q92913 245 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 DTD2Q96FN9 168 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 TMEM41AQ96HV5 264 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 MRI1Q9BV20 369 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 RSPO3Q9BXY4 272 aaPredicted RBP8.74□□□□□ -1.01
CCDC40-212ENST00000574799 SEC11CQ9BY50 192 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 PLEKHA1Q9HB21 404 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 BCL2L10Q9HD36 194 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 NCDNQ9UBB6 729 aa8.74□□□□□ -1.01
CCDC40-212ENST00000574799 TSTD3H0UI37 97 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 RNASEK-C17orf49H0YIS7 233 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 PHYHO14832 338 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 GLSO94925 669 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 FGF19O95750 216 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 PRF1P14222 555 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 CCKBRP32239 447 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MAP3K8P41279 467 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 RPS15P62841 145 aaKnown RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 SNRPNP63162 240 aaKnown RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 HABP2Q14520 560 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 KCNAB1Q14722 419 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 IRF4Q15306 451 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MICBQ29980 383 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MRM1Q6IN84 353 aaKnown RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 C7orf61Q8IZ16 206 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 COX18Q8N8Q8 333 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TMEM106AQ96A25 262 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MS4A8Q9BY19 250 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 CERS4Q9HA82 394 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 PPP4R1LQ9P1A2 415 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 SERGEFQ9UGK8 458 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF443Q9Y2A4 671 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 CNTRLQ7Z7A1 2325 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TMEM72A0PK05 275 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 URADA6NGE7 173 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 ID2Q02363 134 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 DHRS2Q13268 280 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TCEA2Q15560 299 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 OR1Q1Q15612 314 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 SGCAQ16586 387 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 C14orf28Q4W4Y0 310 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TANGO2Q6ICL3 276 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 PSRC1Q6PGN9 363 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 CLEC9AQ6UXN8 241 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 STAC2Q6ZMT1 411 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 ETV3LQ6ZN32 361 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 GABRG1Q8N1C3 465 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 AMER3Q8N944 861 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 SLAMF9Q96A28 289 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 RPP25Q9BUL9 199 aaKnown RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 PRO1933Q9H354 126 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 A0A1W2PPH5 198 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MAN2B1O00754 1011 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 EIF1AYO14602 144 aaKnown RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TSPAN15O95858 294 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MT-ND4LP03901 98 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 EIF1AXP47813 144 aaKnown RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 POU3F4P49335 361 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 ENPP2Q13822 863 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 INPP5JQ15735 1006 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 DPPA2Q7Z7J5 298 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MISPQ8IVT2 679 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 OR4N5Q8IXE1 308 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TEX19Q8NA77 164 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 ACBD4Q8NC06 268 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 SLC16A11Q8NCK7 471 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 CMKLR1Q99788 373 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 ZNF649Q9BS31 505 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TRPM6Q9BX84 2022 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MTHFD2LQ9H903 347 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-212ENST00000574799 MMP26Q9NRE1 261 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 TNFSF18Q9UNG2 199 aa8.73□□□□□ -1.01
CCDC40-212ENST00000574799 CALCBP10092 127 aa8.72□□□□□ -1.01
CCDC40-212ENST00000574799 ADCYAP1P18509 176 aa8.72□□□□□ -1.01
CCDC40-212ENST00000574799 FRKP42685 505 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-212ENST00000574799 PNLIPRP2P54317 469 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms