RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 HCFC1P51610 2035 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 UQCRHLA0A096LP55 91 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 SLC22A20A6NK97 555 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 TNFRSF13BO14836 293 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 LDLRAD4O15165 306 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 POLR3GO15318 223 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ATP8B1O43520 1251 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 SPRY3O43610 288 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 CXCL13O43927 109 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 RAMP1O60894 148 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 SS18L1O75177 396 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 NPIPB7O75200 414 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 LYPD3O95274 346 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 TOMM40O96008 361 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 CRHP06850 196 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 UBTFL6P0CB48 400 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ATP6V1C1P21283 382 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 MYF6P23409 242 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ELK4P28324 431 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 CHI3L1P36222 383 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 EIF1P41567 113 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ASCL1P50553 236 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 P2RY4P51582 365 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 DSTNP60981 165 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 IRX1P78414 480 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 KCNJ10P78508 379 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 H3F3AP84243 136 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ROR2Q01974 943 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 EPS8Q12929 822 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 SNTB1Q13884 538 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 PON3Q15166 354 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 QPRTQ15274 297 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 RNPS1Q15287 305 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ZNF260Q3ZCT1 412 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 AGKQ53H12 422 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 MRPL2Q5T653 305 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 PRAMEF8Q5VWM4 474 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 PRAMEF7Q5VXH5 474 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 METTL21CQ5VZV1 264 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ENPP6Q6UWR7 440 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 NHLRC1Q6VVB1 395 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 MEX3BQ6ZN04 569 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ZNF836Q6ZNA1 936 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 PLEKHM3Q6ZWE6 761 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 EIF3MQ7L2H7 374 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ZNF367Q7RTV3 350 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 NET1Q7Z628 596 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 CALHM3Q86XJ0 350 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 VRK2Q86Y07 508 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 GRAMD2AQ8IUY3 354 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 UBQLNLQ8IYU4 475 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 GCNT2Q8N0V5 402 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 EID3Q8N140 333 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 GJC3Q8NFK1 279 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 OR10Q1Q8NGQ4 319 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 RNF128Q8TEB7 428 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 SCARB1Q8WTV0 552 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 C10orf82Q8WW14 230 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ST8SIA1Q92185 356 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 RNASE6Q93091 150 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 INTS12Q96CB8 462 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 TMEM19Q96HH6 336 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 URB1-AS1Q96HZ7 61 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ARL5BQ96KC2 179 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 LURAP1Q96LR2 239 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 ZBTB18Q99592 522 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 THUMPD3Q9BV44 507 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 SF3B5Q9BWJ5 86 aaKnown RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 EXO5Q9H790 373 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 TMEM185BQ9H7F4 350 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 PTGES2Q9H7Z7 377 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 MTHFD2LQ9H903 347 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-211ENST00000574728 EXD2Q9NVH0 621 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 FGFR1OP2Q9NVK5 253 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 COQ3Q9NZJ6 369 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 CCDC167Q9P0B6 97 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 IL36RNQ9UBH0 155 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 AASSQ9UDR5 926 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 PCDHGB4Q9UN71 923 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 SVEP1Q4LDE5 3571 aa4.19□□□□□ -1.74
PRPF8-211ENST00000574728 IGKV1D-42A0A075B6H8 117 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 A0A0G2JND7 137 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 A0A0G2JPF8 293 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 FAM90A10PA6NDY2 464 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 ZNF716A6NP11 495 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 DEFB108AA8MXU0 73 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 HNRNPCL2B2RXH8 293 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 HNRNPCL3B7ZW38 293 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 FTCDNL1E5RQL4 147 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 NR5A2O00482 541 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 TNFSF11O14788 317 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 SMAD9O15198 467 aaKnown RBP4.18□□□□□ -1.74
PRPF8-211ENST00000574728 SEC14L5O43304 696 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 TPST1O60507 370 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 HNRNPCL1O60812 293 aaKnown RBP4.18□□□□□ -1.74
PRPF8-211ENST00000574728 CTAG2O75638 210 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 SEC14L2O76054 403 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 PGM3O95394 542 aa4.18□□□□□ -1.74
PRPF8-211ENST00000574728 KRT75O95678 551 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms