RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 LRRC75AQ8NAA5 344 aa15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 FAM46AQ96IP4 442 aaKnown RBP15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 TSPAN32Q96QS1 320 aa15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 SEPHS2Q99611 448 aa15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 SYT3Q9BQG1 590 aa15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 OR51B6Q9H340 312 aa15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 DCAF13Q9NV06 445 aaKnown RBP15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 NDUFAF4Q9P032 175 aa15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 SAMD4AQ9UPU9 718 aaKnown RBP15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 CMAHPQ9Y471 501 aa15.35■□□□□ 0.05
CTDNEP1-207ENST00000572043 TMEM129A0AVI4 362 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 ENTPD5O75356 428 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 SERPINA5P05154 406 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 H1F0P07305 194 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 FAM157BP0CG42 384 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 RPL4P36578 427 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 RPL27P61353 136 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 ERVK-25P63136 954 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 SGCAQ16586 387 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 SLC36A2Q495M3 483 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 RNF113BQ8IZP6 322 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 PGAM4Q8N0Y7 254 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 SLC30A7Q8NEW0 376 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 OR52J3Q8NH60 311 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 SLC7A13Q8TCU3 470 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 C10orf105Q8TEF2 133 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 CDRT15Q96T59 188 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 DOK1Q99704 481 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 MRPL37Q9BZE1 423 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 TPK1Q9H3S4 243 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 DENND2DQ9H6A0 471 aaPredicted RBP15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 STX18Q9P2W9 335 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 SPEF1Q9Y4P9 236 aa15.34■□□□□ 0.05
CTDNEP1-207ENST00000572043 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 CENPBD1B2RD01 187 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 H7C1C5 153 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 DCTN3O75935 186 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 ADRA2AP08913 450 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 SLC9A3P48764 834 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 PPOXP50336 477 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 PDLIM4P50479 330 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 LCN6P62502 163 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 VLDLRP98155 873 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 FHL1Q13642 323 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 C10orf128Q5T292 105 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 LRP11Q86VZ4 500 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 PAQR4Q8N4S7 273 aaPredicted RBP15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 MRPL24Q96A35 216 aaKnown RBP15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 NMD3Q96D46 503 aaKnown RBP15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 KCNK17Q96T54 332 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 RAB1BQ9H0U4 201 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 CDH20Q9HBT6 801 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 YAE1D1Q9NRH1 226 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 FBXL3Q9UKT7 428 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 ADAM18Q9Y3Q7 739 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 UGT2A1Q9Y4X1 527 aa15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 FLNAP21333 2647 aaKnown RBP15.33■□□□□ 0.04
CTDNEP1-207ENST00000572043 A0A096LNT2 108 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 TRBV4-1A0A0J9YWV2 114 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 NPIPB13A6NJU9 1138 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 NPIPB4C9JG80 1138 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 IGHMP01871 453 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 CSF3P09919 207 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 SLC25A16P16260 332 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 HSF2Q03933 536 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 GGTLC2Q14390 218 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 KRT72Q14CN4 511 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 MAD2L1BPQ15013 274 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 TAF11Q15544 211 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 ZBED5Q49AG3 693 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 SAMD4BQ5PRF9 694 aaKnown RBP15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 SLC25A47Q6Q0C1 308 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 DEFB107AQ8IZN7 70 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 ICA1LQ8NDH6 482 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 ZNF519Q8TB69 540 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 C7orf34Q96L11 122 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 RBP7Q96R05 134 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 ALG12Q9BV10 488 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 KCNN2Q9H2S1 579 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 CCNB1IP1Q9NPC3 277 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 SLC7A8Q9UHI5 535 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 DUSP13Q9UII6 198 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 MAGEL2Q9UJ55 1249 aa15.32■□□□□ 0.04
CTDNEP1-207ENST00000572043 IQCMA0A1B0GVH7 501 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 A0A1W2PPL8 197 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 A0A1W2PRQ8 180 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 ARPC2O15144 300 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 NR2C1P13056 603 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 ZNF26P17031 533 aaPredicted RBP15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 RHCEP18577 417 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 CCNOP22674 350 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 GLRXP35754 106 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 ALDH3B1P43353 468 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 ZNF133P52736 654 aaPredicted RBP15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 ERVS71-1P61550 626 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 MRPS34P82930 218 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 PLP2Q04941 152 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 DGCR6Q14129 220 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 SEC23BQ15437 767 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 FXNQ16595 210 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms