RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ZNF550Q7Z398 422 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 C7orf61Q8IZ16 206 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 MCHR2Q969V1 340 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 SEH1LQ96EE3 360 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 TINAGL1Q9GZM7 467 aaPredicted RBP13.99□□□□□ -0.17
SMG6-207ENST00000570756 UQCC1Q9NVA1 299 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 DNAJB12Q9NXW2 375 aaKnown RBP13.99□□□□□ -0.17
SMG6-207ENST00000570756 LRRC72A6NJI9 287 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 FGF18O76093 207 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 ITGA5P08648 1049 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 PTGFRP43088 359 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 CXADRP78310 365 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 NAAAQ02083 359 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 AIMP2Q13155 320 aaKnown RBP13.99□□□□□ -0.17
SMG6-207ENST00000570756 PEA15Q15121 130 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 NR0B2Q15466 257 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 ALG11Q2TAA5 492 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 LYG2Q86SG7 212 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 PARGQ86W56 976 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 GALNT16Q8N428 558 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 BPIFB2Q8N4F0 458 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 SLC30A7Q8NEW0 376 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 TSEN15Q8WW01 171 aaKnown RBP13.99□□□□□ -0.17
SMG6-207ENST00000570756 LAMP5Q9UJQ1 280 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 KLHDC2Q9Y2U9 406 aa13.99□□□□□ -0.17
SMG6-207ENST00000570756 REV3LO60673 3130 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 PDE4DIPQ5VU43 2346 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 TRAV20A0A0B4J274 112 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 F8VVB4 439 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 F8VWA3 439 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 EIF1AYO14602 144 aaKnown RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 YKT6O15498 198 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 LILRB3O75022 631 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 PEBP1P30086 187 aaKnown RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 EIF1AXP47813 144 aaKnown RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 SCGB2B2Q4G0G5 96 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 C1orf53Q5VUE5 145 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 ABHD13Q7L211 337 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 VN1R4Q7Z5H5 301 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 BAP18Q8IXM2 172 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 ZSCAN1Q8NBB4 408 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 KREMEN2Q8NCW0 462 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 NT5CQ8TCD5 201 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 DOK4Q8TEW6 326 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 WNT2BQ93097 391 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 RAB7BQ96AH8 199 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 RSPRY1Q96DX4 576 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 GPX7Q96SL4 187 aaPredicted RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 PHB2Q99623 299 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 TCEAL7Q9BRU2 100 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 CXXC1Q9P0U4 656 aaPredicted RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 DAPP1Q9UN19 280 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 HSPB2A8KAH6 182 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 FGF19O95750 216 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 EMDP50402 254 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 ID2Q02363 134 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 MEF2DQ14814 521 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 HSPB2Q16082 182 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 PLEKHN1Q494U1 663 aaPredicted RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 FAM109BQ6ICB4 259 aaPredicted RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 KIRREL2Q6UWL6 708 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 BIVMQ86UB2 503 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 OR4K17Q8NGC6 315 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 FOXRED1Q96CU9 486 aaPredicted RBP13.98□□□□□ -0.17
SMG6-207ENST00000570756 MNTQ99583 582 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 PRRT1Q99946 306 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 RNF122Q9H9V4 155 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 GSN-AS1Q9NRJ2 163 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 SLC22A11Q9NSA0 550 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 KCNK6Q9Y257 313 aa13.98□□□□□ -0.17
SMG6-207ENST00000570756 NUP210LQ5VU65 1888 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 OR52A4PA6NMU1 304 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 TTLL8A6PVC2 850 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ZNF208O43345 1280 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 F12P00748 615 aaPredicted RBP13.97□□□□□ -0.17
SMG6-207ENST00000570756 CXCL10P02778 98 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 CD74P04233 296 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ZNF10P21506 573 aaPredicted RBP13.97□□□□□ -0.17
SMG6-207ENST00000570756 PBX2P40425 430 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 MAP3K8P41279 467 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 SNRPEP62304 92 aaKnown RBP13.97□□□□□ -0.17
SMG6-207ENST00000570756 EGR3Q06889 387 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 PJVKQ0ZLH3 352 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ECH1Q13011 328 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 SMCO1Q147U7 214 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 DHCR24Q15392 516 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 PNLIPRP3Q17RR3 467 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 DEFB134Q4QY38 66 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ZNF627Q7L945 461 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ZAR1Q86SH2 424 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 SLC25A42Q86VD7 318 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 CDC20BQ86Y33 519 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 OR51A4Q8NGJ6 313 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 OR10AC1Q8NH08 325 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ZCCHC10Q8TBK6 192 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ARL5BQ96KC2 179 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 TIMM29Q9BSF4 260 aa13.97□□□□□ -0.17
SMG6-207ENST00000570756 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.97□□□□□ -0.17
SMG6-207ENST00000570756 FARSAQ9Y285 508 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms