RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TMEM53Q6P2H8 277 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 CBLL1Q75N03 491 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 RNF113BQ8IZP6 322 aaKnown RBP14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 HPS1Q92902 700 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ZNF347Q96SE7 839 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 KCNK17Q96T54 332 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 DYNLRB1Q9NP97 96 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 MAN2C1Q9NTJ4 1040 aa14.7□□□□□ -0.06
MAP1LC3B-208ENST00000570189 IGHV4-61A0A0C4DH41 118 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 M0R233 179 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 NME4O00746 187 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ATP8B1O43520 1251 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SHOX2O60902 331 aaPredicted RBP14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 IFNW1P05000 195 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 F13BP05160 661 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 MMP7P09237 267 aaPredicted RBP14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ZNF16P17020 682 aaPredicted RBP14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 MRPS11P82912 194 aaKnown RBP14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 GGTLC2Q14390 218 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FAM205BPQ63HN1 556 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 POU5F2Q8N7G0 328 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SLC30A7Q8NEW0 376 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 OR4K5Q8NGD3 323 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 MOSPD2Q8NHP6 518 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SPATA3Q8NHX4 192 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 UBASH3BQ8TF42 649 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 GEMIN6Q8WXD5 167 aaKnown RBP14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 BPIFA2Q96DR5 249 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 C1orf159Q96HA4 380 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 TPD52L3Q96J77 140 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SH3GL3Q99963 347 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ALG12Q9BV10 488 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 BPESC1Q9GZL8 116 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ANKRD19PQ9H560 264 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 EFCAB1Q9HAE3 211 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SIAEQ9HAT2 523 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ABCD2Q9UBJ2 740 aa14.69□□□□□ -0.06
MAP1LC3B-208ENST00000570189 IGLV3-9A0A075B6K5 115 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 CXCR6O00574 342 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 PRSS23O95084 383 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ADRA2AP08913 450 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 APEHP13798 732 aaKnown RBP14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ZNF250P15622 560 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SLC9A3P48764 834 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 LIPEQ05469 1076 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 PRKCDQ05655 676 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FHL1Q13642 323 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ALG10Q5BKT4 473 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 GKAP1Q5VSY0 366 aaPredicted RBP14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FAM166AQ6J272 317 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 CXXC5Q7LFL8 322 aaKnown RBP14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SLC16A14Q7RTX9 510 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ZCCHC24Q8N2G6 241 aaKnown RBP14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 LRRC75AQ8NAA5 344 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 OR1J2Q8NGS2 313 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 NABP1Q96AH0 204 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 REV1Q9UBZ9 1251 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 UGT2A1Q9Y4X1 527 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SVEP1Q4LDE5 3571 aa14.68□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FFAR1O14842 300 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 PIP5K1CO60331 668 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 LMX1BO60663 402 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ICMTO60725 284 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 LILRA1O75019 489 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 PATE4P0C8F1 98 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SLC7A2P52569 658 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 RPL27P61353 136 aaKnown RBP14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SF3A3Q12874 501 aaKnown RBP eCLIP14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 TRAM2Q15035 370 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 IFI44LQ53G44 452 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 THEM4Q5T1C6 240 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SLC25A47Q6Q0C1 308 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 UGT2A3Q6UWM9 527 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FOXL2NBQ6ZUU3 175 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 VTCN1Q7Z7D3 282 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 TREML1Q86YW5 311 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SYT14Q8NB59 555 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ACOT11Q8WXI4 607 aaPredicted RBP14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 HDAC2Q92769 488 aaKnown RBP14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 MSI2Q96DH6 328 aaKnown RBP14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FNDC11Q9BVV2 318 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 MYLK2Q9H1R3 596 aa14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ZNF346Q9UL40 294 aaKnown RBP14.67□□□□□ -0.06
MAP1LC3B-208ENST00000570189 IFI30P13284 250 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 GSK3BP49841 420 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 CHN2P52757 468 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 PLP2Q04941 152 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 LAPTM4AQ15012 233 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 TBC1D28Q2M2D7 210 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 FAM27BQ5VT28 67 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 RGS7BPQ6MZT1 257 aaPredicted RBP14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 NRMQ8IXM6 262 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 C1orf174Q8IYL3 243 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 PAQR4Q8N4S7 273 aaPredicted RBP14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 RBM15BQ8NDT2 890 aaKnown RBP14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 ZNF519Q8TB69 540 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 BCL2L14Q9BZR8 327 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 LRMDAQ9H2I8 198 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 KCNS2Q9ULS6 477 aa14.66□□□□□ -0.06
MAP1LC3B-208ENST00000570189 SNX13Q9Y5W8 968 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms