RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SMYD1Q8NB12 490 aa11.31□□□□□ -0.6
SPG7-221ENST00000569720 SOX7Q9BT81 388 aa11.31□□□□□ -0.6
SPG7-221ENST00000569720 BAG5Q9UL15 447 aa11.31□□□□□ -0.6
SPG7-221ENST00000569720 SNX13Q9Y5W8 968 aa11.31□□□□□ -0.6
SPG7-221ENST00000569720 AQP12BA6NM10 295 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 LRRN3E7EW58 273 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 C11orf98E9PRG8 122 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 HAX1O00165 279 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 CXCR6O00574 342 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 TCF21O43680 179 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 TPST2O60704 377 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 IL2RGP31785 369 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 KDELR2P33947 212 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 CDH15P55291 814 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 BIDP55957 195 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 TTC33Q6PID6 262 aaPredicted RBP11.3□□□□□ -0.6
SPG7-221ENST00000569720 NHLRC1Q6VVB1 395 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 DHFR2Q86XF0 187 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 AQP12AQ8IXF9 295 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 LRGUKQ96M69 825 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 ZNF75AQ96N20 296 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 ZNF346Q9UL40 294 aaKnown RBP11.3□□□□□ -0.6
SPG7-221ENST00000569720 SAMD4AQ9UPU9 718 aaKnown RBP11.3□□□□□ -0.6
SPG7-221ENST00000569720 NBEAL1Q6ZS30 2694 aa11.3□□□□□ -0.6
SPG7-221ENST00000569720 CPSF4LA6NMK7 179 aaKnown RBP11.29□□□□□ -0.6
SPG7-221ENST00000569720 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 M0QX08 132 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 M0R3H8 397 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 RNF13O43567 381 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 FARS2O95363 451 aaKnown RBP11.29□□□□□ -0.6
SPG7-221ENST00000569720 HIST1H2ABP04908 130 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 IGFBP1P08833 259 aaPredicted RBP11.29□□□□□ -0.6
SPG7-221ENST00000569720 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 GPR6P46095 362 aaPredicted RBP11.29□□□□□ -0.6
SPG7-221ENST00000569720 DVL1P1P54792 670 aaPredicted RBP11.29□□□□□ -0.6
SPG7-221ENST00000569720 SELENOVP59797 346 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 SELENOWP63302 87 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
SPG7-221ENST00000569720 CCNIQ14094 377 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 RAB39AQ14964 217 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 TRIP10Q15642 601 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 ENTPD8Q5MY95 495 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 LCN8Q6JVE9 175 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 LINC00114Q6XXX2 140 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 SLC35D2Q76EJ3 337 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 ZNF771Q7L3S4 317 aaPredicted RBP11.29□□□□□ -0.6
SPG7-221ENST00000569720 HIST3H2AQ7L7L0 130 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 SLC22A24Q8N4F4 322 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 OR6X1Q8NH79 312 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 SLC26A7Q8TE54 656 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 RDH5Q92781 318 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 TMEM54Q969K7 222 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 ZNF566Q969W8 418 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 C1orf159Q96HA4 380 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 NSMCE2Q96MF7 247 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 ARHGDIGQ99819 225 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 WFDC6Q9BQY6 131 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 NANSQ9NR45 359 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 GLTPQ9NZD2 209 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 ZNF224Q9NZL3 707 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 SLC7A8Q9UHI5 535 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 DUSP13Q9UII6 198 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 GPR160Q9UJ42 338 aa11.29□□□□□ -0.6
SPG7-221ENST00000569720 A0A1W2PPW3 197 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 SLC22A23A1A5C7 686 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 B4DSR2 109 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 ACOT8O14734 319 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 CH25HO95992 272 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 OPN1SWP03999 348 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 SERPINA5P05154 406 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 OR8G3PP0DMU2 310 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 TCN1P20061 433 aaPredicted RBP11.28□□□□□ -0.6
SPG7-221ENST00000569720 ACHEP22303 614 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 ALDH3B1P43353 468 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 ZP4Q12836 540 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 ZNF74Q16587 644 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 DUSP7Q16829 419 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 TMEM53Q6P2H8 277 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 DPPA2Q7Z7J5 298 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 GLCCI1Q86VQ1 547 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 SKA3Q8IX90 412 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 OR6T1Q8NGN1 323 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 SLC25A44Q96H78 314 aaPredicted RBP11.28□□□□□ -0.6
SPG7-221ENST00000569720 MPP4Q96JB8 637 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 POLR2J2Q9GZM3 115 aaKnown RBP11.28□□□□□ -0.6
SPG7-221ENST00000569720 POLR2J3Q9H1A7 115 aaKnown RBP11.28□□□□□ -0.6
SPG7-221ENST00000569720 C1orf198Q9H425 327 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 RNF121Q9H920 327 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 DCAF13Q9NV06 445 aaKnown RBP11.28□□□□□ -0.6
SPG7-221ENST00000569720 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 POMPQ9Y244 141 aa11.28□□□□□ -0.6
SPG7-221ENST00000569720 TRAPPC13A5PLN9 417 aa11.27□□□□□ -0.61
SPG7-221ENST00000569720 DHHO43323 396 aa11.27□□□□□ -0.61
SPG7-221ENST00000569720 PTHP01270 115 aa11.27□□□□□ -0.61
SPG7-221ENST00000569720 TFP02787 698 aa11.27□□□□□ -0.61
SPG7-221ENST00000569720 HPXP02790 462 aa11.27□□□□□ -0.61
SPG7-221ENST00000569720 SAGP10523 405 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms