RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 OLIG3Q7RTU3 272 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 GRINAQ7Z429 371 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 ABHD12BQ7Z5M8 362 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 GPAT4Q86UL3 456 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 SLC22A9Q8IVM8 553 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 RIBC1Q8N443 379 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 OR9K2Q8NGE7 335 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 OR5D16Q8NGK9 328 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 RDH5Q92781 318 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 LRRC58Q96CX6 371 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 L3HYPDHQ96EM0 354 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 RITA1Q96K30 269 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 C1orf147Q96MC9 270 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 TSSK3Q96PN8 268 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 ALKBH3Q96Q83 286 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 OR7D2Q96RA2 312 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 PAFAH2Q99487 392 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 PKP2Q99959 881 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 NMUR2Q9GZQ4 415 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 SLITRK2Q9H156 845 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 ZNF665Q9H7R5 613 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 NOX3Q9HBY0 568 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 RRAGDQ9NQL2 400 aaPredicted RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 UTP11Q9Y3A2 253 aaKnown RBP4.78□□□□□ -1.64
CDH13-211ENST00000568770 CMAHPQ9Y471 501 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 CCL27Q9Y4X3 112 aa4.78□□□□□ -1.64
CDH13-211ENST00000568770 TMEM72A0PK05 275 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 POC1B-GALNT4F8VUJ3 575 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 PROP1O75360 226 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 STX11O75558 287 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 CRCPO75575 148 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 UPK3AO75631 287 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 RP2O75695 350 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 AKR7A3O95154 331 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 GSTA1P08263 222 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 KRT16P08779 473 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 MDKP21741 143 aaPredicted RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 PRPH2P23942 346 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 PGM1P36871 562 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 ALDH3B1P43353 468 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 IDH2P48735 452 aaKnown RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 EVX1P49640 407 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 SERPINB9P50453 376 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 RPL38P63173 70 aaKnown RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 SRSF4Q08170 494 aaKnown RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 C2orf54Q08AI8 447 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 NPRL3Q12980 569 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 MFSD13AQ14CX5 517 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 MAD2L1BPQ15013 274 aaPredicted RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 MAPK14Q16539 360 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 RFTN2Q52LD8 501 aaPredicted RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 AVPI1Q5T686 147 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 REP15Q6BDI9 236 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 CLEC6AQ6EIG7 209 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 ACSM6Q6P461 480 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 NIPAL3Q6P499 406 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 LEG1Q6P5S2 330 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 EMBQ6PCB8 327 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 PAQR6Q6TCH4 344 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 ZNF782Q6ZMW2 699 aaPredicted RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 LRP11Q86VZ4 500 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 CCNYL1Q8N7R7 359 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 TMEM99Q8N816 258 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 FAM71CQ8NEG0 241 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 OR7A2PQ8NGA2 310 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 OR2T11Q8NH01 316 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 OR5AK3PQ8NH89 298 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 MAGEE2Q8TD90 523 aaPredicted RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 DCAKDQ8WVC6 231 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 DPF1Q92782 380 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 DDIT4LQ96D03 193 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 MTERF3Q96E29 417 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 METTL2AQ96IZ6 378 aaKnown RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 FCRL1Q96LA6 429 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 ZNF317Q96PQ6 595 aaPredicted RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 CCT7Q99832 543 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 ZNF416Q9BWM5 594 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 CRLF2Q9HC73 371 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 MOV10Q9HCE1 1003 aaKnown RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 C1orf109Q9NX04 203 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 GAR1Q9NY12 217 aaKnown RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 NINJ2Q9NZG7 142 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 PDP1Q9P0J1 537 aaPredicted RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 MYEF2Q9P2K5 600 aaKnown RBP4.77□□□□□ -1.65
CDH13-211ENST00000568770 OPN4Q9UHM6 478 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 MKLN1Q9UL63 735 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 FZR1Q9UM11 496 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 PCDHGB4Q9UN71 923 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 COX11Q9Y6N1 276 aa4.77□□□□□ -1.65
CDH13-211ENST00000568770 DNAH3Q8TD57 4116 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 TMED7-TICAM2A0A0A6YYA0 188 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 LIPT2A6NK58 231 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 CLDN24A6NM45 220 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 SLC28A1O00337 649 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 AP3D1O14617 1153 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 SCAMP2O15127 329 aaKnown RBP4.76□□□□□ -1.65
CDH13-211ENST00000568770 ZSCAN12O43309 604 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 ZNF208O43345 1280 aa4.76□□□□□ -1.65
CDH13-211ENST00000568770 C6orf47O95873 294 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms