RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ZP4Q12836 540 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 SCGB2A2Q13296 93 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 TBC1D28Q2M2D7 210 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 RUNDC3AQ59EK9 446 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 SPATA46Q5T0L3 261 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 ACSM5Q6NUN0 579 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 TTC33Q6PID6 262 aaPredicted RBP13.22□□□□□ -0.29
NME3-211ENST00000568561 USP51Q70EK9 711 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 NANOGNBQ7Z5D8 188 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 DHDDSQ86SQ9 333 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 LRRC18Q8N456 261 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 SYT14Q8NB59 555 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 C11orf65Q8NCR3 313 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
NME3-211ENST00000568561 TMPRSS13Q9BYE2 586 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 WIPI2Q9Y4P8 454 aa13.22□□□□□ -0.29
NME3-211ENST00000568561 SLC22A23A1A5C7 686 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 BCL10O95999 233 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 IGHG1P01857 330 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 F13BP05160 661 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 EGR1P18146 543 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 MAKP20794 623 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 CCNOP22674 350 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 CRYBB2P43320 205 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 UCP2P55851 309 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 PCGF3Q3KNV8 242 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 SLC36A2Q495M3 483 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 TMEM255AQ5JRV8 349 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 NOXO1Q8NFA2 376 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 OR1J1Q8NGS3 322 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 ZNF519Q8TB69 540 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 FAM216AQ8WUB2 273 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 C22orf15Q8WYQ4 148 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 C11orf40Q8WZ69 217 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 MCHR2Q969V1 340 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 TAMM41Q96BW9 452 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 RAB39BQ96DA2 213 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 SLCO1C1Q9NYB5 712 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 GPR160Q9UJ42 338 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 ZNF229Q9UJW7 825 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 TRIM33Q9UPN9 1127 aa13.21□□□□□ -0.29
NME3-211ENST00000568561 A0A0G2JMP0 313 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 A0A0X1KG70 313 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 IQCMA0A1B0GVH7 501 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 TMEM89A2RUT3 159 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 TRAPPC13A5PLN9 417 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 CLDN25C9JDP6 229 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 MCIDASD6RGH6 385 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 BLOC1S5-TXNDC5H3BN57 136 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 TRIM77I1YAP6 450 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 SLC2A10O95528 541 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 SNAP29O95721 258 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 IGHV2-5P01817 119 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 HIST1H2ABP04908 130 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 MMP7P09237 267 aaPredicted RBP13.2□□□□□ -0.3
NME3-211ENST00000568561 ASAH2BP0C7U1 165 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 CD247P20963 164 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 DRD4P21917 467 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 CDAP32320 146 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 RBMXP38159 391 aaKnown RBP13.2□□□□□ -0.3
NME3-211ENST00000568561 RAD52P43351 418 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 COMPP49747 757 aaPredicted RBP13.2□□□□□ -0.3
NME3-211ENST00000568561 ARFIP2P53365 341 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 HSF2Q03933 536 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 RPL18Q07020 188 aaKnown RBP13.2□□□□□ -0.3
NME3-211ENST00000568561 PABPC1L2AQ5JQF8 200 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 HIST3H2AQ7L7L0 130 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 RETREG3Q86VR2 466 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 ZNF101Q8IZC7 436 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 CPEB3Q8NE35 698 aaKnown RBP13.2□□□□□ -0.3
NME3-211ENST00000568561 OR4M2Q8NGB6 313 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 LRRC8CQ8TDW0 803 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 HIST1H2ACQ93077 130 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 PRSS27Q9BQR3 290 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 ZNF426Q9BUY5 554 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 BCL2L14Q9BZR8 327 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 C1orf198Q9H425 327 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 EVA1AQ9H8M9 152 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 SAP30LQ9HAJ7 183 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 ESM1Q9NQ30 184 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 MEPEQ9NQ76 525 aaPredicted RBP13.2□□□□□ -0.3
NME3-211ENST00000568561 DECR2Q9NUI1 292 aa13.2□□□□□ -0.3
NME3-211ENST00000568561 SPRY3O43610 288 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 ENTPD5O75356 428 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 TGDSO95455 350 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 APLNRP35414 380 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 MPV17P39210 176 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 WNT5AP41221 380 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 ZNF84P51523 738 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 PLP2Q04941 152 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 FMODQ06828 376 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 HIST3H3Q16695 136 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 DCAF12L2Q5VW00 463 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 PFN4Q8NHR9 129 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 IPCEF1Q8WWN9 437 aaPredicted RBP13.19□□□□□ -0.3
NME3-211ENST00000568561 ASB10Q8WXI3 467 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 THOC1Q96FV9 657 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms