RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 B9A039 149 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 ICMTO60725 284 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 GMNNO75496 209 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 TXNDC12O95881 172 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 F12P00748 615 aaPredicted RBP7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 HLA-HP01893 362 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 CD14P08571 375 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 IGFBP1P08833 259 aaPredicted RBP7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 NR2C1P13056 603 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 B4GALT1P15291 398 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 CALB2P22676 271 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 NR4A1P22736 598 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 MSX2P35548 267 aaPredicted RBP7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 SERPINF1P36955 418 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 CDKN1AP38936 164 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 FABP6P51161 128 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 RIPPLY3P57055 190 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 SMIM11AP58511 58 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 CTXN1P60606 82 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 RAP1BP61224 184 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 RAB1AP62820 205 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 RAP1AP62834 184 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 CHRNB3Q05901 458 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 TNK1Q13470 666 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 TRIM25Q14258 630 aaKnown RBP7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 SEC23BQ15437 767 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 ADIPOQQ15848 244 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 MTX3Q5HYI7 312 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 FAM27BQ5VT28 67 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 LCN8Q6JVE9 175 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 ZER1Q7Z7L7 766 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 OAFQ86UD1 273 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 CDK20Q8IZL9 346 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 NANOS1Q8WY41 292 aaKnown RBP7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 NSMCE2Q96MF7 247 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 TSPAN32Q96QS1 320 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 DOK1Q99704 481 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 GPA33Q99795 319 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 WACQ9BTA9 647 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 SIAEQ9HAT2 523 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 TAS2R1Q9NYW7 299 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 FAM32AQ9Y421 112 aaKnown RBP7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 ATP23Q9Y6H3 246 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 TLN2Q9Y4G6 2542 aa7.08□□□□□ -1.28
HDGFL3-205ENST00000568129 NSD1Q96L73 2696 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 FN1P02751 2386 aaKnown RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 TRAV27A0A087WT01 109 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 TRBV4-1A0A0J9YWV2 114 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 ARPC3O15145 178 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 NDUFS7O75251 213 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 SERPINI2O75830 405 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 KRT36O76013 467 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 SEC14L2O76054 403 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 SNAP29O95721 258 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 SAGP10523 405 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 BMP4P12644 408 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 APEHP13798 732 aaKnown RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 TCN1P20061 433 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 PCSK6P29122 969 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 THBS4P35443 961 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 GLRXP35754 106 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 PPOXP50336 477 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 IDH3GP51553 393 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 EFNA4P52798 201 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 CLRN1P58418 232 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 DSCR9P59020 149 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 MS4A2Q01362 244 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 CLEC12BQ2HXU8 276 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 KRTAP21-3Q3LHN1 58 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 C1orf94Q6P1W5 598 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 DPY19L2P2Q6ZN68 376 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 RINLQ6ZS11 566 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 SYT9Q86SS6 491 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 SYT14Q8NB59 555 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 OR4K5Q8NGD3 323 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 OR13C2Q8NGS9 318 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 OR51A7Q8NH64 312 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 RBP7Q96R05 134 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 CACNG6Q9BXT2 260 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 C1orf198Q9H425 327 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 GSX1Q9H4S2 264 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 MAGIXQ9H6Y5 334 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 VSX1Q9NZR4 365 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 GDF2Q9UK05 429 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 POU2F3Q9UKI9 436 aa7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 PRPF19Q9UMS4 504 aaKnown RBP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.07□□□□□ -1.28
HDGFL3-205ENST00000568129 NAV3Q8IVL0 2385 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 SLC22A23A1A5C7 686 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 TRIM64A6NGJ6 449 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 TRIM64BA6NI03 449 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 VSTM5A8MXK1 200 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 VWC2LB2RUY7 222 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 MCIDASD6RGH6 385 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 H7C1Q1 480 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 hCG_2039718K7EN88 272 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 IMPA2O14732 288 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 ACOT8O14734 319 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 NDUFB2O95178 105 aa7.06□□□□□ -1.28
HDGFL3-205ENST00000568129 FARS2O95363 451 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms