RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 RPL27P61353 136 aaKnown RBP21.81■■□□□ 1.08
FANCA-228ENST00000567943 SPIBQ01892 262 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 SEC23BQ15437 767 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 TAF11Q15544 211 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 ZBED5Q49AG3 693 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 TRPM8Q7Z2W7 1104 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 SKA3Q8IX90 412 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 SLC22A24Q8N4F4 322 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 OR4K5Q8NGD3 323 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 CA10Q9NS85 328 aa21.81■■□□□ 1.08
FANCA-228ENST00000567943 ABCA1O95477 2261 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 H7C417 338 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 SSX4O60224 188 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 PDE5AO76074 875 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 IGHMP01871 453 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 OR8G3PP0DMU2 310 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 ZNF84P51523 738 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 SMIM11AP58511 58 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 CD47Q08722 323 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 TSPAN32Q96QS1 320 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 BARX1Q9HBU1 254 aaPredicted RBP21.8■■□□□ 1.08
FANCA-228ENST00000567943 IL1RAPQ9NPH3 570 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 TAS2R1Q9NYW7 299 aa21.8■■□□□ 1.08
FANCA-228ENST00000567943 HIVEP2P31629 2446 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 UBL3O95164 117 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 GADD45GO95257 159 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 SLC2A10O95528 541 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 PATE4P0C8F1 98 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 RPL4P36578 427 aaKnown RBP21.79■■□□□ 1.08
FANCA-228ENST00000567943 OMPP47874 163 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 LIMS1P48059 325 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 GIPRP48546 466 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 PTDSS1P48651 473 aaKnown RBP21.79■■□□□ 1.08
FANCA-228ENST00000567943 RAB1AP62820 205 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 FMODQ06828 376 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 ZDHHC21Q8IVQ6 265 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 FGFBP3Q8TAT2 258 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 NMD3Q96D46 503 aaKnown RBP21.79■■□□□ 1.08
FANCA-228ENST00000567943 FBXO17Q96EF6 278 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 MS4A3Q96HJ5 214 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 KCNK17Q96T54 332 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 SH3GL3Q99963 347 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 FUZQ9BT04 418 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 REG4Q9BYZ8 158 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 PRPF19Q9UMS4 504 aaKnown RBP21.79■■□□□ 1.08
FANCA-228ENST00000567943 AURKCQ9UQB9 309 aa21.79■■□□□ 1.08
FANCA-228ENST00000567943 YLPM1P49750 1951 aaKnown RBP21.79■■□□□ 1.08
FANCA-228ENST00000567943 IGHV2OR16-5A0A0B4J2B6 119 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 SH3PXD2BA1X283 911 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 ENTPD5O75356 428 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 FARS2O95363 451 aaKnown RBP21.78■■□□□ 1.08
FANCA-228ENST00000567943 RAB36O95755 333 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 ZNF26P17031 533 aaPredicted RBP21.78■■□□□ 1.08
FANCA-228ENST00000567943 ZNF133P52736 654 aaPredicted RBP21.78■■□□□ 1.08
FANCA-228ENST00000567943 ERVK-25P63136 954 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 TRIM25Q14258 630 aaKnown RBP21.78■■□□□ 1.08
FANCA-228ENST00000567943 ADIPOQQ15848 244 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 C10orf128Q5T292 105 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 FAM205BPQ63HN1 556 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 VHLLQ6RSH7 139 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 DHFR2Q86XF0 187 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 CLDN22Q8N7P3 220 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 ZNF519Q8TB69 540 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 ALG12Q9BV10 488 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 C1orf21Q9H246 121 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 MUC13Q9H3R2 512 aa21.78■■□□□ 1.08
FANCA-228ENST00000567943 KRCC1Q9NPI7 259 aaPredicted RBP21.78■■□□□ 1.08
FANCA-228ENST00000567943 CHD3Q12873 2000 aaKnown RBP21.77■■□□□ 1.08
FANCA-228ENST00000567943 IGHV4-30-2A0A087WSY4 118 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 IGKV1D-43A0A0B4J1Z2 117 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 NR2C1P13056 603 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 ZNF14P17017 642 aaPredicted RBP21.77■■□□□ 1.08
FANCA-228ENST00000567943 RRM2P31350 389 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 SERPINF1P36955 418 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 MS4A2Q01362 244 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 MTX3Q5HYI7 312 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 LCN8Q6JVE9 175 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 NUP37Q8NFH4 326 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 IL17RDQ8NFM7 739 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 OR10H5Q8NGA6 315 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 OR4F15Q8NGB8 312 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 NSMAFQ92636 917 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 RSRC1Q96IZ7 334 aaKnown RBP21.77■■□□□ 1.08
FANCA-228ENST00000567943 CLPTM1LQ96KA5 538 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 NDEL1Q9GZM8 345 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 DENND2DQ9H6A0 471 aaPredicted RBP21.77■■□□□ 1.08
FANCA-228ENST00000567943 SMURF2Q9HAU4 748 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 SIGLEC7Q9Y286 467 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 ADAM18Q9Y3Q7 739 aa21.77■■□□□ 1.08
FANCA-228ENST00000567943 RTTNQ86VV8 2226 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 SONP18583 2426 aaKnown RBP21.76■■□□□ 1.07
FANCA-228ENST00000567943 A0A096LNT2 108 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 TCRBV5S2A0A599 114 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 A6NIZ1 184 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 PTP4A3O75365 173 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 LY6HO94772 140 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 UBOX5O94941 541 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 CD14P08571 375 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 OR4A8P0C604 315 aa21.76■■□□□ 1.07
FANCA-228ENST00000567943 NUDT6P53370 316 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms