RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 GIPC3Q8TF64 312 aa15.02■□□□□ -0
COMMD4-220ENST00000567720 FEVQ99581 238 aa15.02■□□□□ -0
COMMD4-220ENST00000567720 LIME1Q9H400 295 aa15.02■□□□□ -0
COMMD4-220ENST00000567720 ESRP2Q9H6T0 727 aaKnown RBP15.02■□□□□ -0
COMMD4-220ENST00000567720 SEC61A2Q9H9S3 476 aa15.02■□□□□ -0
COMMD4-220ENST00000567720 MGAT4BQ9UQ53 548 aa15.02■□□□□ -0
COMMD4-220ENST00000567720 RNF115Q9Y4L5 304 aa15.02■□□□□ -0
COMMD4-220ENST00000567720 IER3IP1Q9Y5U9 82 aa15.02■□□□□ -0
COMMD4-220ENST00000567720 WNT11O96014 354 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 HLA-HP01893 362 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 NR2C1P13056 603 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 APEHP13798 732 aaKnown RBP15.01□□□□□ -0.01
COMMD4-220ENST00000567720 RPS6KA3P51812 740 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 ATP6AP1Q15904 470 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 CLEC12AQ5QGZ9 265 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 C1QTNF12Q5T7M4 302 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 GPR139Q6DWJ6 353 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 SLC25A47Q6Q0C1 308 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 ADCK1Q86TW2 530 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 NABP1Q96AH0 204 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 ERMAPQ96PL5 475 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-220ENST00000567720 IFT27Q9BW83 186 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 IL20Q9NYY1 176 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 PDP1Q9P0J1 537 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-220ENST00000567720 CRNNQ9UBG3 495 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-220ENST00000567720 AP4S1Q9Y587 144 aa15.01□□□□□ -0.01
COMMD4-220ENST00000567720 IGHV1-18A0A0C4DH31 117 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 SLC22A23A1A5C7 686 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 PRSS37A4D1T9 235 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 BHLHE40O14503 412 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 XKRYO14609 159 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 ABCD4O14678 606 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 ARPC3O15145 178 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 IGKV3-15P01624 115 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 IGLV1-44P01699 117 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 CD3EP07766 207 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 CELA3BP08861 270 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 HOXB1P14653 301 aaPredicted RBP15□□□□□ -0.01
COMMD4-220ENST00000567720 CD40P25942 277 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 CDAP32320 146 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 CAPZA2P47755 286 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 ZNF84P51523 738 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 RPL13AP3Q6NVV1 102 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 SHQ1Q6PI26 577 aaKnown RBP15□□□□□ -0.01
COMMD4-220ENST00000567720 KLHL17Q6TDP4 642 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 TMEM108Q6UXF1 575 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 PAMR1Q6UXH9 720 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 CDH24Q86UP0 819 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 MDP1Q86V88 176 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 SLC22A24Q8N4F4 322 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 OR52L1Q8NGH7 329 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 PYDC1Q8WXC3 89 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 NSMAFQ92636 917 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 NEUROG1Q92886 237 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 SYT4Q9H2B2 425 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 UBTD1Q9HAC8 227 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 TBC1D23Q9NUY8 699 aa15□□□□□ -0.01
COMMD4-220ENST00000567720 VSX1Q9NZR4 365 aaPredicted RBP15□□□□□ -0.01
COMMD4-220ENST00000567720 SHISA9B4DS77 424 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 CECR9P0C854 216 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 CTLA4P16410 223 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 GSTM3P21266 225 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 GABPB1Q06547 395 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-220ENST00000567720 NRN1LQ496H8 165 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 THEM4Q5T1C6 240 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 CD300LDQ6UXZ3 194 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 FOXL2NBQ6ZUU3 175 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 SKA3Q8IX90 412 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 OR4Q3Q8NH05 313 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 LILRB1Q8NHL6 650 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-220ENST00000567720 FGFBP3Q8TAT2 258 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 FNDC8Q8TC99 324 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 LRTOMTQ8WZ04 291 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 SLC38A2Q96QD8 506 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 SH3GL3Q99963 347 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 DENND2DQ9H6A0 471 aaPredicted RBP14.99□□□□□ -0.01
COMMD4-220ENST00000567720 B3GNT2Q9NY97 397 aa14.99□□□□□ -0.01
COMMD4-220ENST00000567720 H3BNX3 289 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 PATE4P0C8F1 98 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 OR8G3PP0DMU2 310 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 CD79AP11912 226 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 FCGR1AP12314 374 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 HIST1H1CP16403 213 aaKnown RBP14.98□□□□□ -0.01
COMMD4-220ENST00000567720 PRKACGP22612 351 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 PTAFRP25105 342 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 FASP25445 335 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 CDKN2AP42771 156 aaKnown RBP14.98□□□□□ -0.01
COMMD4-220ENST00000567720 IDH3GP51553 393 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-220ENST00000567720 MRPS34P82930 218 aaKnown RBP14.98□□□□□ -0.01
COMMD4-220ENST00000567720 DBPQ10586 325 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-220ENST00000567720 NPRL3Q12980 569 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 ETFDHQ16134 617 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 GSG1Q2KHT4 349 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 SLC36A3Q495N2 470 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 B3GLCTQ6Y288 498 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 AMIGO2Q86SJ2 522 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 CCDC36Q8IYA8 594 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-220ENST00000567720 SDR9C7Q8NEX9 313 aa14.98□□□□□ -0.01
COMMD4-220ENST00000567720 NANOS1Q8WY41 292 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms