RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 HS3ST5Q8IZT8 346 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 PARP8Q8N3A8 854 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 OR52N5Q8NH56 324 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 TSSK6Q9BXA6 273 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 PRRG3Q9BZD7 231 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 PLA2G12AQ9BZM1 189 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 SYT4Q9H2B2 425 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 SEMA6AQ9H2E6 1030 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 KRT84Q9NSB2 600 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 TMEM38BQ9NVV0 291 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 FBXL3Q9UKT7 428 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 OAZ3Q9UMX2 235 aa10.67□□□□□ -0.7
SF3B3-208ENST00000567250 A0A096LPE4 126 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 A0A1W2PPZ6 126 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 SLC22A23A1A5C7 686 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 RIIAD1A6NNX1 92 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 H7C1C5 153 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 BHLHE40O14503 412 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 SEC14L2O76054 403 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 UBL3O95164 117 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 SLC2A10O95528 541 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 IFNGP01579 166 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 THBDP07204 575 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 OR8G3PP0DMU2 310 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF3P17036 446 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 CRABP1P29762 137 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 LCN6P62502 163 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 ESRRGP62508 458 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 MRPS34P82930 218 aaKnown RBP10.66□□□□□ -0.7
SF3B3-208ENST00000567250 FMODQ06828 376 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 ALKBH2Q6NS38 261 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 SLC27A4Q6P1M0 643 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 FAHD1Q6P587 224 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 LEG1Q6P5S2 330 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 TMEM108Q6UXF1 575 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 LNX2Q8N448 690 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 SLC22A24Q8N4F4 322 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 OR8D4Q8NGM9 314 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 BCL2L2Q92843 193 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-208ENST00000567250 PKP2Q99959 881 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 RBM4BQ9BQ04 359 aaKnown RBP10.66□□□□□ -0.7
SF3B3-208ENST00000567250 RBM4Q9BWF3 364 aaKnown RBP10.66□□□□□ -0.7
SF3B3-208ENST00000567250 KCNN2Q9H2S1 579 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 VSX1Q9NZR4 365 aaPredicted RBP10.66□□□□□ -0.7
SF3B3-208ENST00000567250 KLHL21Q9UJP4 597 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 ORC6Q9Y5N6 252 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 SLC25A15Q9Y619 301 aa10.66□□□□□ -0.7
SF3B3-208ENST00000567250 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 A0A1W2PPL8 197 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 KHDRBS3O75525 346 aaKnown RBP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 HIST1H1CP16403 213 aaKnown RBP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 PRKACGP22612 351 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 IGFBP5P24593 272 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 PTAFRP25105 342 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 POU1F1P28069 291 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 GRK5P34947 590 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 GSG1Q2KHT4 349 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 PGGHGQ32M88 737 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 SLC36A2Q495M3 483 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 HIST2H2BCQ6DN03 193 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 LRFN4Q6PJG9 635 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 SLC25A47Q6Q0C1 308 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 PQLC1Q8N2U9 271 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 SDR9C7Q8NEX9 313 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 OR4K13Q8NH42 304 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 NSMAFQ92636 917 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 NMD3Q96D46 503 aaKnown RBP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 ZNF837Q96EG3 531 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 PIK3IP1Q96FE7 263 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 C9orf16Q9BUW7 83 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 CLEC4MQ9H2X3 399 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 NELFAQ9H3P2 528 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 REV1Q9UBZ9 1251 aa10.65□□□□□ -0.7
SF3B3-208ENST00000567250 HRNRQ86YZ3 2850 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-208ENST00000567250 FLNBO75369 2602 aaKnown RBP10.65□□□□□ -0.71
SF3B3-208ENST00000567250 A0A1W2PR80 420 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 SAC3D1A6NKF1 404 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 RAB36O95755 333 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 HRGP04196 525 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 TP53P04637 393 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-208ENST00000567250 CD3EP07766 207 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 MSR1P21757 451 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 PAICSP22234 425 aaKnown RBP10.64□□□□□ -0.71
SF3B3-208ENST00000567250 ARR3P36575 388 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 PPP2R2BQ00005 443 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 GLO1Q04760 184 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 SLC35F1Q5T1Q4 408 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 KDM4DQ6B0I6 523 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 FOXL2NBQ6ZUU3 175 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 PTCHD4Q6ZW05 846 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 SLC16A14Q7RTX9 510 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 FAM169BQ8N8A8 192 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 WDR31Q8NA23 367 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 OR52E2Q8NGJ4 325 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 PLPPR2Q96GM1 343 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 PLEKHA8Q96JA3 519 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 SLC38A2Q96QD8 506 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 NMNAT3Q96T66 252 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms