RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	HSD17B1	P14061	328 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	GLRX	P35754	106 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	RPL27	P61353	136 aa	Known RBP	11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	MYBPC1	Q00872	1141 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	RAB39A	Q14964	217 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	SLC36A2	Q495M3	483 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	FAM205BP	Q63HN1	556 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	KRT80	Q6KB66	452 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	TMEM53	Q6P2H8	277 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	TMPRSS11F	Q6ZWK6	438 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	SLC16A14	Q7RTX9	510 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	OAF	Q86UD1	273 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	ZNF584	Q8IVC4	421 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	CDK20	Q8IZL9	346 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	PGAM4	Q8N0Y7	254 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	LRRC75A	Q8NAA5	344 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	RBM15B	Q8NDT2	890 aa	Known RBP	11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	OR4K5	Q8NGD3	323 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	FNDC8	Q8TC99	324 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	C10orf105	Q8TEF2	133 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	HDAC2	Q92769	488 aa	Known RBP	11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	DOK1	Q99704	481 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	SH3GL3	Q99963	347 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	C1orf198	Q9H425	327 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	GORASP2	Q9H8Y8	452 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	TAGLN3	Q9UI15	199 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	CMAHP	Q9Y471	501 aa		11.96	□□□□□ -0.49
PKD1-231	ENST00000566784	TRAV27	A0A087WT01	109 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784		A0A1W2PRQ8	180 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	TMEM129	A0AVI4	362 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	H1F0	P07305	194 aa	Known RBP	11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	PATE4	P0C8F1	98 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	RHCE	P18577	417 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	EVX1	P49640	407 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	CTXN1	P60606	82 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	RPS23	P62266	143 aa	Known RBP	11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	MRPS34	P82930	218 aa	Known RBP	11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	PPP2R2B	Q00005	443 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	GALK2	Q01415	458 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	LOXL1	Q08397	574 aa	Predicted RBP	11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	DGCR6	Q14129	220 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	SAMD4B	Q5PRF9	694 aa	Known RBP	11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	THEM4	Q5T1C6	240 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	RRM2B	Q7LG56	351 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	RNF148	Q8N7C7	305 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	ANKS4B	Q8N8V4	417 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	OR51A7	Q8NH64	312 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	SLC7A13	Q8TCU3	470 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	C7orf34	Q96L11	122 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	TNFRSF13C	Q96RJ3	184 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	VRK1	Q99986	396 aa	Predicted RBP	11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	RAB1B	Q9H0U4	201 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	SIAE	Q9HAT2	523 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	ARL8B	Q9NVJ2	186 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	NDE1	Q9NXR1	346 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	NDUFAF4	Q9P032	175 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	SLC7A8	Q9UHI5	535 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	MAGEL2	Q9UJ55	1249 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	TMEM5	Q9Y2B1	443 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	FAM32A	Q9Y421	112 aa	Known RBP	11.95	□□□□□ -0.5
PKD1-231	ENST00000566784	ABCA2	Q9BZC7	2435 aa		11.95	□□□□□ -0.5
PKD1-231	ENST00000566784		A6NIZ1	184 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	INAFM1	C9JVW0	142 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	NDUFS8	O00217	210 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	CDC42EP2	O14613	210 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	LY6H	O94772	140 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	SLC2A10	O95528	541 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	PTH	P01270	115 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	TP53	P04637	393 aa	Predicted RBP	11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	MMP7	P09237	267 aa	Predicted RBP	11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	PDLIM4	P50479	330 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	RAP1B	P61224	184 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	RAP1A	P62834	184 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	FMOD	Q06828	376 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	CD47	Q08722	323 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	TOP3A	Q13472	1001 aa	Predicted RBP	11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	SPATS1	Q496A3	300 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	ZBED5	Q49AG3	693 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	SLC25A47	Q6Q0C1	308 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	TBPL2	Q6SJ96	375 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	SVOPL	Q8N434	492 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	SLC30A7	Q8NEW0	376 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	OR13C2	Q8NGS9	318 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	ZNF519	Q8TB69	540 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	MRPL24	Q96A35	216 aa	Known RBP	11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	NABP1	Q96AH0	204 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	DHRS1	Q96LJ7	313 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	TSPAN32	Q96QS1	320 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	RBP7	Q96R05	134 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	RNF121	Q9H920	327 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	CD300A	Q9UGN4	299 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	ZNF346	Q9UL40	294 aa	Known RBP	11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	UGT2A1	Q9Y4X1	527 aa		11.94	□□□□□ -0.5
PKD1-231	ENST00000566784	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.94	□□□□□ -0.5	8e-10	■■□□□ 11.7
PKD1-231	ENST00000566784	IGKV1D-43	A0A0B4J1Z2	117 aa		11.93	□□□□□ -0.5
PKD1-231	ENST00000566784	SLC22A23	A1A5C7	686 aa		11.93	□□□□□ -0.5
PKD1-231	ENST00000566784	VWC2L	B2RUY7	222 aa		11.93	□□□□□ -0.5
PKD1-231	ENST00000566784	TLX2	O43763	284 aa	Predicted RBP	11.93	□□□□□ -0.5
PKD1-231	ENST00000566784	CD5L	O43866	347 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms