RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CCDC120Q96HB5 630 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 NIPSNAP1Q9BPW8 284 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 SFXN3Q9BWM7 321 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 MCCC2Q9HCC0 563 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 IL20Q9NYY1 176 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 NOX1Q9Y5S8 564 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 FLVCR1Q9Y5Y0 555 aa11.2□□□□□ -0.62
SF3B3-206ENST00000565990 DIDO1Q9BTC0 2240 aaKnown RBP11.19□□□□□ -0.62
SF3B3-206ENST00000565990 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 LOC110117498-PIK3R3F6TDL0 507 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 TP53P04637 393 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-206ENST00000565990 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 POU2F1P14859 743 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 ZNF43P17038 809 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 GSTM3P21266 225 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 AGTR1P30556 359 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 S100A5P33763 92 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 OPRM1P35372 400 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 SLC15A1P46059 708 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 CRISP1P54107 249 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 CBX3Q13185 183 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 SLC25A30Q5SVS4 291 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 RASSF6Q6ZTQ3 369 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 NCCRP1Q6ZVX7 275 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-206ENST00000565990 NANOGNBQ7Z5D8 188 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 GPAT4Q86UL3 456 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 LIX1LQ8IVB5 337 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 MCEMP1Q8IX19 187 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 CLDN22Q8N7P3 220 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 OR13C2Q8NGS9 318 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 LILRB4Q8NHJ6 448 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 MOSPD2Q8NHP6 518 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 NDNFQ8TB73 568 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 TXNDC15Q96J42 360 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 ZNF385AQ96PM9 386 aaKnown RBP11.19□□□□□ -0.62
SF3B3-206ENST00000565990 GPX7Q96SL4 187 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-206ENST00000565990 CCDC32Q9BV29 185 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 ENKD1Q9H0I2 346 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 PARPBPQ9NWS1 579 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 CRNNQ9UBG3 495 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-206ENST00000565990 REV1Q9UBZ9 1251 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 PMF1-BGLAPU3KQ54 211 aa11.19□□□□□ -0.62
SF3B3-206ENST00000565990 TRAV27A0A087WT01 109 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 TRAF3IP2O43734 574 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-206ENST00000565990 PLGP00747 810 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-206ENST00000565990 CD8BP10966 210 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 OSMP13725 252 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 AHCYP23526 432 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 PER3P56645 1201 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 VBP1P61758 197 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 SLX4IPQ5VYV7 408 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 XKRXQ6PP77 449 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 SMARCD3Q6STE5 483 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 KLHL17Q6TDP4 642 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 NUFIP2Q7Z417 695 aaKnown RBP11.18□□□□□ -0.62
SF3B3-206ENST00000565990 BTLAQ7Z6A9 289 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 UEVLDQ8IX04 471 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 OR6K3Q8NGY3 331 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 ASB5Q8WWX0 329 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 ZNF775Q96BV0 537 aaPredicted RBP11.18□□□□□ -0.62
SF3B3-206ENST00000565990 UCK2Q9BZX2 261 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 NRIP3Q9NQ35 241 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 INIPQ9NRY2 104 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 RASSF1Q9NS23 344 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 ZNF226Q9NYT6 803 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 EMC3Q9P0I2 261 aa11.18□□□□□ -0.62
SF3B3-206ENST00000565990 MYO18BQ8IUG5 2567 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 CCRL2O00421 344 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 ARPC3O15145 178 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 RNF13O43567 381 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 NDUFB2O95178 105 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 CNOT4O95628 575 aaKnown RBP11.17□□□□□ -0.62
SF3B3-206ENST00000565990 TXNDC12O95881 172 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 IGHMP01871 453 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 F13BP05160 661 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 LCKP06239 509 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 CD14P08571 375 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 APEHP13798 732 aaKnown RBP11.17□□□□□ -0.62
SF3B3-206ENST00000565990 EPHA2P29317 976 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 CHRNB4P30926 498 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 LIPAP38571 399 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 PCYT1AP49585 367 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 RGS6P49758 472 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 SMSP52788 366 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 DEFA1P59665 94 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 DEFA3P59666 94 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 NCS1P62166 190 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 OCLNQ16625 522 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
SF3B3-206ENST00000565990 ALG10Q5BKT4 473 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 ARMC4Q5T2S8 1044 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 RPL13AP3Q6NVV1 102 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 DPY19L2P2Q6ZN68 376 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 ZNF620Q6ZNG0 422 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 SLC35D2Q76EJ3 337 aa11.17□□□□□ -0.62
SF3B3-206ENST00000565990 KIF18BQ86Y91 864 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms