RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 MYBPC1Q00872 1141 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 ZBED5Q49AG3 693 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 THEM4Q5T1C6 240 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 VHLLQ6RSH7 139 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 TBPL2Q6SJ96 375 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 SLC16A14Q7RTX9 510 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 MYPOPQ86VE0 399 aaPredicted RBP17.22■□□□□ 0.35
CMTM3-211ENST00000565922 SKA3Q8IX90 412 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 LRRC75AQ8NAA5 344 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 HDAC2Q92769 488 aaKnown RBP17.22■□□□□ 0.35
CMTM3-211ENST00000565922 POP5Q969H6 163 aaKnown RBP17.22■□□□□ 0.35
CMTM3-211ENST00000565922 FAM46AQ96IP4 442 aaKnown RBP17.22■□□□□ 0.35
CMTM3-211ENST00000565922 DHRS1Q96LJ7 313 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 TNFRSF13CQ96RJ3 184 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 KCNK17Q96T54 332 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 C1orf198Q9H425 327 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 FAM53CQ9NYF3 392 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 ACTR3BQ9P1U1 418 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF346Q9UL40 294 aaKnown RBP17.22■□□□□ 0.35
CMTM3-211ENST00000565922 AURKCQ9UQB9 309 aa17.22■□□□□ 0.35
CMTM3-211ENST00000565922 GADD45GO95257 159 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 OR4A8P0C604 315 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 MSX2P35548 267 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-211ENST00000565922 GUCA1AP43080 201 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-211ENST00000565922 GALK2Q01415 458 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 SPIBQ01892 262 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 DAG1Q14118 895 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 EFNB3Q15768 340 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 IGFN1Q86VF2 1251 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 OR4K5Q8NGD3 323 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 ZNF75AQ96N20 296 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 RNF121Q9H920 327 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 NOX3Q9HBY0 568 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 GRHPRQ9UBQ7 328 aa17.21■□□□□ 0.35
CMTM3-211ENST00000565922 GDF2Q9UK05 429 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-211ENST00000565922 XKRYO14609 159 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 CDC42EP2O14613 210 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 DIRAS1O95057 198 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 NDUFB2O95178 105 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 SERPINA5P05154 406 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 CD14P08571 375 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 DSCR9P59020 149 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 RPS23P62266 143 aaKnown RBP17.2■□□□□ 0.34
CMTM3-211ENST00000565922 MRPS34P82930 218 aaKnown RBP17.2■□□□□ 0.34
CMTM3-211ENST00000565922 SNTB2Q13425 540 aaKnown RBP17.2■□□□□ 0.34
CMTM3-211ENST00000565922 ADIPOQQ15848 244 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 SWI5Q1ZZU3 235 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 MEX3DQ86XN8 651 aaKnown RBP17.2■□□□□ 0.34
CMTM3-211ENST00000565922 ARIH2OSQ8N7S6 290 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 ZNF519Q8TB69 540 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 MS4A3Q96HJ5 214 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 TSPAN32Q96QS1 320 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 SIAEQ9HAT2 523 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 IL1RAPQ9NPH3 570 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 PRPF19Q9UMS4 504 aaKnown RBP17.2■□□□□ 0.34
CMTM3-211ENST00000565922 FKBP7Q9Y680 259 aa17.2■□□□□ 0.34
CMTM3-211ENST00000565922 TRBV4-1A0A0J9YWV2 114 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 AHCYL1O43865 530 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 SSX4O60224 188 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 NDUFS7O75251 213 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 SLC2A10O95528 541 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 STAMBPO95630 424 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 CSF3P09919 207 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 IFNGR2P38484 337 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 OMPP47874 163 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 LIMS1P48059 325 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 HGFACQ04756 655 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 PLP2Q04941 152 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 TNK1Q13470 666 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 FHL1Q13642 323 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 CLEC2AQ6UVW9 174 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 CLEC9AQ6UXN8 241 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 OR52J3Q8NH60 311 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 NMD3Q96D46 503 aaKnown RBP17.19■□□□□ 0.34
CMTM3-211ENST00000565922 ZNF570Q96NI8 536 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 SH3GL3Q99963 347 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 C1orf21Q9H246 121 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 SLC7A8Q9UHI5 535 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 TMCC3Q9ULS5 477 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 SIGLEC7Q9Y286 467 aa17.19■□□□□ 0.34
CMTM3-211ENST00000565922 CHD3Q12873 2000 aaKnown RBP17.19■□□□□ 0.34
CMTM3-211ENST00000565922 IQCMA0A1B0GVH7 501 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 SH3PXD2BA1X283 911 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 SMAD7O15105 426 aaKnown RBP17.18■□□□□ 0.34
CMTM3-211ENST00000565922 ZNF35P13682 527 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 NR4A1P22736 598 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 THBS4P35443 961 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 EFNA4P52798 201 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 FMODQ06828 376 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 RAB39AQ14964 217 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 IQCCQ4KMZ1 466 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 GPR139Q6DWJ6 353 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 KRT80Q6KB66 452 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 SLC25A47Q6Q0C1 308 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 DNM1P46Q6ZS02 220 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 ZDHHC21Q8IVQ6 265 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 CIARTQ8N365 385 aaPredicted RBP17.18■□□□□ 0.34
CMTM3-211ENST00000565922 OR1J2Q8NGS2 313 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 BCAS4Q8TDM0 211 aa17.18■□□□□ 0.34
CMTM3-211ENST00000565922 NSMAFQ92636 917 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms