RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 MYCBPQ99417 103 aaPredicted RBP16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 CNN2Q99439 309 aaKnown RBP16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 MND1Q9BWT6 205 aa16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 NUAK2Q9H093 628 aa16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 ADGRL4Q9HBW9 690 aa16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 SRA1Q9HD15 236 aaKnown RBP16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 SPRR3Q9UBC9 169 aa16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 DNAJC13O75165 2243 aa16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 ZNF407Q9C0G0 2248 aa16.97■□□□□ 0.31
CSPG4P13-201ENST00000565545 TMEM129A0AVI4 362 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 ZNF716A6NP11 495 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 KHDRBS3O75525 346 aaKnown RBP16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 PGA4P0DJD7 388 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 PGA3P0DJD8 388 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 KLK2P20151 261 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 CLDN17P56750 224 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 CLRN1P58418 232 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 RUNX1T1Q06455 604 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 SYT6Q5T7P8 510 aaPredicted RBP16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 ZNF787Q6DD87 383 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 ZNF367Q7RTV3 350 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 NANOGP1Q8N7R0 232 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 Q8NA96 180 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 OR6K6Q8NGW6 343 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 ROBO4Q8WZ75 1007 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 ZMYND19Q96E35 227 aaPredicted RBP16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 ZNF845Q96IR2 970 aaPredicted RBP16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 FAM192AQ9GZU8 254 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 PRDM14Q9GZV8 571 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 RNF122Q9H9V4 155 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 RCE1Q9Y256 329 aa16.96■□□□□ 0.31
CSPG4P13-201ENST00000565545 IGKV3D-15A0A087WSY6 115 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR14I1A6ND48 311 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 GPR171O14626 319 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 MYL12BO14950 172 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 SLC16A7O60669 478 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR2T7P0C7T2 308 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 PYCR1P32322 319 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 RASGEF1BQ0VAM2 473 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 SATL1Q86VE3 508 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZIC4Q8N9L1 334 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 NOXO1Q8NFA2 376 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR51L1Q8NGJ5 315 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR2T27Q8NH04 317 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 TMEM45BQ96B21 275 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 TSSK2Q96PF2 358 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 MNTQ99583 582 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 EMC6Q9BV81 110 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 MARCH7Q9H992 704 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 EMC3Q9P0I2 261 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 KLHL9Q9P2J3 617 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 CAMK2AQ9UQM7 478 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF175Q9Y473 711 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 FLVCR1Q9Y5Y0 555 aa16.95■□□□□ 0.3
CSPG4P13-201ENST00000565545 IGLV1-36A0A0B4J1U3 117 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 DCTN6O00399 190 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 SEC14L2O76054 403 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 ADRA2AP08913 450 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 CAPZA2P47755 286 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 ETV1P50549 477 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 HSF2Q03933 536 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 GLO1Q04760 184 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 CAMK2DQ13557 499 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 RAB39AQ14964 217 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 RNPS1Q15287 305 aaKnown RBP16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 HIST3H3Q16695 136 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 B3GLCTQ6Y288 498 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 SLC16A9Q7RTY1 509 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 SYT14Q8NB59 555 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR13F1Q8NGS4 319 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 RNF128Q8TEB7 428 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNRF4Q8WWF5 429 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 NMD3Q96D46 503 aaKnown RBP16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 MRPL48Q96GC5 212 aaKnown RBP16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 PRRG4Q9BZD6 226 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 ERVK13-1Q9NX77 482 aa16.94■□□□□ 0.3
CSPG4P13-201ENST00000565545 DAPL1A0PJW8 107 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 C12orf71A8MTZ7 269 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF432O94892 652 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 INMTO95050 263 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 APOL3O95236 402 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 PTHP01270 115 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 LIMS3P0CW19 117 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 LIMS4P0CW20 117 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 FCGR2AP12318 317 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 CTLA4P16410 223 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF133P52736 654 aaPredicted RBP16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 KRTCAP3Q53RY4 240 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 FAM180AQ6UWF9 173 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 SHFQ7M4L6 423 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 EGFL6Q8IUX8 553 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 SLC35F2Q8IXU6 374 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 KLHL36Q8N4N3 616 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 CISD2Q8N5K1 135 aaKnown RBP16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR10H4Q8NGA5 316 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR52N1Q8NH53 320 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 TMEM54Q969K7 222 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 COG8Q96MW5 612 aa16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 ZNF385AQ96PM9 386 aaKnown RBP16.93■□□□□ 0.3
CSPG4P13-201ENST00000565545 OR2M2Q96R28 347 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms