RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 SPRED1Q7Z699 444 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CBARPQ8N350 705 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 NLGN4YQ8NFZ3 816 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 NMES1Q9C002 83 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 APOBEC3BQ9UH17 382 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 ASCC3Q8N3C0 2202 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 SCN3AQ9NY46 2000 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 FAM155AB1AL88 458 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 HMGN2P05204 90 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 CPMP14384 443 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ZNF93P35789 620 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 SLC5A12Q1EHB4 618 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ULBP2Q9BZM5 246 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 RIMS4Q9H426 269 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 MARCH4Q9P2E8 410 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 GABRQQ9UN88 632 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 SERTM2A0A1B0GWG4 89 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 DEDDO75618 318 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CNIH1O95406 144 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CD14P08571 375 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 OR1D4P47884 311 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 EPHA5P54756 1037 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ZP2Q05996 745 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 WDR73Q6P4I2 378 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 GRAMD2AQ8IUY3 354 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 SLC35B4Q969S0 331 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ISG20Q96AZ6 181 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 PINX1Q96BK5 328 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 SORT1Q99523 831 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 WWTR1Q9GZV5 400 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ZNF355PQ9NSJ1 428 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 DIMT1Q9UNQ2 313 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 PRRC2BQ5JSZ5 2229 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 KNDC1Q76NI1 1749 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 A0A0A6YYJ9 748 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 LRRC3CA6NJW4 275 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 RNASEK-C17orf49H0YIS7 233 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 RPL17P18621 184 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 OR1Q1Q15612 314 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 VWA1Q6PCB0 445 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ZNF765Q7L2R6 523 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 FA2HQ7L5A8 372 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ISCA2Q86U28 154 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 OR2AE1Q8NHA4 323 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 GPX8Q8TED1 209 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 UCN3Q969E3 161 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CAPNS2Q96L46 248 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 C12orf42Q96LP6 360 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CCNL2Q96S94 520 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 AMBRA1Q9C0C7 1298 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 BARX1Q9HBU1 254 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 TJP1Q07157 1748 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ENSAO43768 121 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 RNGTTO60942 597 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 ABHD16AO95870 558 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 FCGR2CP31995 323 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 HOXD13P35453 343 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 GP2P55259 537 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 POU3F1Q03052 451 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 DMWDQ09019 674 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ALKBH1Q13686 389 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 ACOT4Q8N9L9 421 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 SLC35A4Q96G79 324 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 FAAP24Q9BTP7 215 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 TMEM38AQ9H6F2 299 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 DLL4Q9NR61 685 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 ACTL7AQ9Y615 435 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 PLRG1O43660 514 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 ZNF354AO60765 605 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 HHEXQ03014 270 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CDC20Q12834 499 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CTU2Q2VPK5 515 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 BRI3BPQ8WY22 251 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 MBOAT4Q96T53 435 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 BOCQ9BWV1 1114 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 KCNK15Q9H427 330 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 TAS2R5Q9NYW4 299 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 B3GALT5Q9Y2C3 310 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 AKAP11Q9UKA4 1901 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 TRBV4-1A0A0J9YWV2 114 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 EIF1BO60739 113 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 MRPL33O75394 65 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 MT-ATP6P00846 226 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 PTHLHP12272 177 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 CCR6P51684 374 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 AGFG1P52594 562 aaKnown RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 TPBGQ13641 420 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 GLYATL3Q5SZD4 288 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 B3GNT9Q6UX72 402 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 UBAC2Q8NBM4 344 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 OR2A1Q8NGT9 310 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 SEC22AQ96IW7 307 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 RAB6CQ9H0N0 254 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 VDAC3Q9Y277 283 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 TRAPPC1Q9Y5R8 145 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 TRIP12Q14669 1992 aaPredicted RBP4.71□□□□□ -1.66
SMG1-211ENST00000565324 OR2A25A4D2G3 310 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 OR6C76A6NM76 312 aa4.71□□□□□ -1.66
SMG1-211ENST00000565324 YIF1AO95070 293 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms