RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NMD3Q96D46 503 aaKnown RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF347Q96SE7 839 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF416Q9BWM5 594 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 RABEP2Q9H5N1 569 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 METTL17Q9H7H0 456 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 HINT3Q9NQE9 182 aaKnown RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 G6PC2Q9NQR9 355 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 NKIRAS2Q9NYR9 191 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF346Q9UL40 294 aaKnown RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 UGT2A1Q9Y4X1 527 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 FBP2O00757 339 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 CDC14BO60729 498 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 ENTPD5O75356 428 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 DEAF1O75398 565 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-213ENST00000565173 TRMUO75648 421 aaKnown RBP7.31□□□□□ -1.24
CAPN3-213ENST00000565173 FARS2O95363 451 aaKnown RBP7.31□□□□□ -1.24
CAPN3-213ENST00000565173 PTHP01270 115 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 IGF2P01344 180 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 IGHV3-13P01766 116 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 IGHG1P01857 330 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 MT-ND1P03886 318 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 HIST1H2ABP04908 130 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 F13BP05160 661 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 FUT1P19526 365 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 LSP1P33241 339 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 CRYBB2P43320 205 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 RAD52P43351 418 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 KLF3P57682 345 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-213ENST00000565173 MYBPC1Q00872 1141 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 RPL18Q07020 188 aaKnown RBP7.31□□□□□ -1.24
CAPN3-213ENST00000565173 NKPD1Q17RQ9 610 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 VMACQ2NL98 169 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 PCGF3Q3KNV8 242 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 SLC36A2Q495M3 483 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 C10orf128Q5T292 105 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 ARMC4Q5T2S8 1044 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 TMEM53Q6P2H8 277 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 FAHD2BQ6P2I3 314 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-213ENST00000565173 HIST3H2AQ7L7L0 130 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 SLC16A14Q7RTX9 510 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 CALHM3Q86XJ0 350 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 NKAIN4Q8IVV8 208 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 SLC30A8Q8IWU4 369 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 LRRC18Q8N456 261 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 SYT14Q8NB59 555 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 OR51F2Q8NH61 342 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 OR10A6Q8NH74 314 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 PFN4Q8NHR9 129 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 TSPEARQ8WU66 669 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 ZFAND2BQ8WV99 257 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 LIPHQ8WWY8 451 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 ASB10Q8WXI3 467 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 C11orf40Q8WZ69 217 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 HIST1H2ACQ93077 130 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 NABP1Q96AH0 204 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 THOC1Q96FV9 657 aaKnown RBP7.31□□□□□ -1.24
CAPN3-213ENST00000565173 FAHD2AQ96GK7 314 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 BCL2L14Q9BZR8 327 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 OR51B6Q9H340 312 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 C1orf198Q9H425 327 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 OCEL1Q9H607 264 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 RNF121Q9H920 327 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 NANOGQ9H9S0 305 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 C20orf141Q9NUB4 165 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 SLCO1C1Q9NYB5 712 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 CACNG2Q9Y698 323 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
CAPN3-213ENST00000565173 LOC100509620A0A075B734 347 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 IGKV1D-43A0A0B4J1Z2 117 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 A0A1W2PRG6 482 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 CENPBD1B2RD01 187 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 ANGPT2O15123 496 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 PLPP2O43688 288 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MGRN1O60291 552 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 OR7A10O76100 309 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 SLC2A10O95528 541 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 PNPP00491 289 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 LCKP06239 509 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 UMPSP11172 480 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 ACADSP16219 412 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 TNFRSF1BP20333 461 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 FUT4P22083 530 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 CFPP27918 469 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 CDAP32320 146 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 AQP2P41181 271 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 WNT5AP41221 380 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 RBM34P42696 430 aaKnown RBP7.3□□□□□ -1.24
CAPN3-213ENST00000565173 COMPP49747 757 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MMP15P51511 669 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 ARFIP2P53365 341 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 CLRN1P58418 232 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 SELENOVP59797 346 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MRPS34P82930 218 aaKnown RBP7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MVKQ03426 396 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 NFYCQ13952 458 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 LAPTM4AQ15012 233 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 TBC1D28Q2M2D7 210 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MMEL1Q495T6 779 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms