RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 MED18Q9BUE0 208 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 HDHD5Q9BXW7 423 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 NXF2Q9GZY0 626 aaKnown RBP17.45■□□□□ 0.38
CLN6-205ENST00000564846 ACOXLQ9NUZ1 547 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 MRPL22Q9NWU5 206 aaKnown RBP17.45■□□□□ 0.38
CLN6-205ENST00000564846 GALNT8Q9NY28 637 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 KLHDC2Q9Y2U9 406 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CUL9Q8IWT3 2517 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 ZNF726A6NNF4 738 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 EIF1AYO14602 144 aaKnown RBP17.45■□□□□ 0.38
CLN6-205ENST00000564846 PGA4P0DJD7 388 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 PGA3P0DJD8 388 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 KLK2P20151 261 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 RPS19P39019 145 aaKnown RBP17.45■□□□□ 0.38
CLN6-205ENST00000564846 TGM4P49221 684 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CLDN20P56880 219 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CARD18P57730 90 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 FMODQ06828 376 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 SLC3A1Q07837 685 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CDC20Q12834 499 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CDK5R1Q15078 307 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 HYAL4Q2M3T9 481 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 HBMQ6B0K9 141 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 SLC18B1Q6NT16 456 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 RPTNQ6XPR3 784 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 GALNTL5Q7Z4T8 443 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 NOXO1Q8NFA2 376 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 OR6Q1Q8NGQ2 317 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 ASB17Q8WXJ9 295 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 SMIM19Q96E16 107 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 PGLYRP3Q96LB9 341 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CDADC1Q9BWV3 514 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■□□□□ 9.7
CLN6-205ENST00000564846 KLHL9Q9P2J3 617 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 GRIP1Q9Y3R0 1128 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 FAM186AA6NE01 2351 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 HSPB2A8KAH6 182 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 PRR32B1ATL7 298 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 TLX3O43711 291 aaPredicted RBP17.44■□□□□ 0.38
CLN6-205ENST00000564846 NR2C1P13056 603 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 ENTPD1P49961 510 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 RORCP51449 518 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 ADAM8P78325 824 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 PLGLB1Q02325 96 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 HSPB2Q16082 182 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 ZNF454Q8N9F8 522 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 SLC26A10Q8NG04 563 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 OR2V1Q8NHB1 315 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 THEM6Q8WUY1 208 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 ADGRG7Q96K78 797 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 SF3B5Q9BWJ5 86 aaKnown RBP17.44■□□□□ 0.38
CLN6-205ENST00000564846 SRXN1Q9BYN0 137 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 FREM2Q5SZK8 3169 aa17.44■□□□□ 0.38
CLN6-205ENST00000564846 NPIPA2E9PIF3 369 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 NPIPA3F8WFD2 350 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 GLSO94925 669 aaPredicted RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 CDRT1O95170 752 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 HRGP04196 525 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 SPARCP09486 303 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 ENPP1P22413 925 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 MEOX1P50221 254 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 CCL11P51671 97 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 CAMK2DQ13557 499 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 SLC17A1Q14916 467 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 TMEM91Q6ZNR0 172 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 CREB3L2Q70SY1 520 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 TMEM251Q8N6I4 163 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 GHSRQ92847 366 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 SCMH1Q96GD3 660 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 FOXN4Q96NZ1 517 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 TTYH2Q9BSA4 534 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 CCDC86Q9H6F5 360 aaKnown RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 QPCTLQ9NXS2 382 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 MRM2Q9UI43 246 aaKnown RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 KCNG2Q9UJ96 466 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 MED13Q9UHV7 2174 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 CD8B2A6NJW9 211 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 H0YC42 278 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 CD8BP10966 210 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 ZNF823P16415 610 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 EDNRAP25101 427 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 RFC3P40938 356 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 OPRL1P41146 370 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 GDI2P50395 445 aaKnown RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 BMXP51813 675 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 CLDN17P56750 224 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 DCTN2Q13561 401 aaKnown RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 HIST3H3Q16695 136 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 ZNF829Q3KNS6 432 aaPredicted RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 TEX30Q5JUR7 227 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 PDSS1Q5T2R2 415 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 GLB1L2Q8IW92 636 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 UBQLNLQ8IYU4 475 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 ZFP62Q8NB50 900 aaPredicted RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 TMEM178AQ8NBL3 297 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 OR9K2Q8NGE7 335 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 UCN2Q96RP3 112 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 DCLRE1CQ96SD1 692 aaKnown RBP17.43■□□□□ 0.38
CLN6-205ENST00000564846 TIGARQ9NQ88 270 aa17.43■□□□□ 0.38
CLN6-205ENST00000564846 SNTG1Q9NSN8 517 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms