RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TLNRD1Q9H1K6 362 aa18.6■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FREM3P0C091 2139 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CPED1A4D0V7 1026 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 GLCEO94923 617 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SPP1P10451 314 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RPS4Y1P22090 263 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MAOBP27338 520 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PPIAP62937 165 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SNTB1Q13884 538 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 EID2Q8N6I1 236 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TRIM43Q96BQ3 446 aaPredicted RBP18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CMBLQ96DG6 245 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 UQCC2Q9BRT2 126 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SYT4Q9H2B2 425 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 KCNG2Q9UJ96 466 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 KIF26BQ2KJY2 2108 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TMEM235A6NFC5 223 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 HCRTR1O43613 425 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CSTAP01040 98 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MRPS10P82664 201 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RBM39Q14498 530 aaKnown RBP18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MOGAT2Q3SYC2 334 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FHL5Q5TD97 284 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 USP53Q70EK8 1073 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CRB3Q9BUF7 120 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SLC22A7Q9Y694 548 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DENND4AQ7Z401 1863 aa18.59■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ACTL6AO96019 429 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AKR1C4P17516 323 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 NPBWR1P48145 328 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PSG6Q00889 435 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 EIF2B1Q14232 305 aaKnown RBP18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 COL19A1Q14993 1142 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR52W1Q6IF63 320 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ULK3Q6PHR2 472 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TMEM200AQ86VY9 491 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PARGQ86W56 976 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PRSS35Q8N3Z0 413 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FAM46BQ96A09 425 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CMKLR1Q99788 373 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR2S2Q9NQN1 319 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DUSP22Q9NRW4 184 aa18.58■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TBC1D3DA0A087WVF3 549 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TBC1D3IA0A087WXS9 549 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 A0A0B4J2A0 478 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TBC1D3LB9A6J9 549 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 EIF4E2O60573 245 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TACSTD2P09758 323 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TBC1D3HP0C7X1 549 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 UBBP0CG47 229 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 UBCP0CG48 685 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RPS27AP62979 156 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 UBA52P62987 128 aaKnown RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PRICKLE4Q2TBC4 344 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF542PQ5EBM4 170 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GLT8D1Q68CQ7 371 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TBC1D3CQ6IPX1 549 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 H3F3CQ6NXT2 135 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ANKRD16Q6P6B7 361 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SLC16A13Q7RTY0 426 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TBC1D3Q8IZP1 549 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 BPIFB2Q8N4F0 458 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GVQW1Q8N7I0 195 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ACBD4Q8NC06 268 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR10R2Q8NGX6 335 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SHPKQ9UHJ6 478 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 A0A0A6YYC8 382 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR14I1A6ND48 311 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 I3L1I5 382 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RDH16O75452 317 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PPM1AP35813 382 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PDGFRLQ15198 375 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 IGSF11Q5DX21 431 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ATPAF1Q5TC12 328 aaPredicted RBP18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 AGBL4Q5VU57 503 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MOB3CQ70IA8 216 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CLEC1AQ8NC01 280 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 NANPQ8TBE9 248 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TMED6Q8WW62 240 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CYYR1Q96J86 154 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TRIM2Q9C040 744 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 COMMD4Q9H0A8 199 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 IFT22Q9H7X7 185 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 EDARQ9UNE0 448 aa18.58■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TO15178 435 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 WNT11O96014 354 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ADPRHP54922 357 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SPOCK1Q08629 439 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GLYATL3Q5SZD4 288 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TMPPEQ6ZT21 453 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 JAGN1Q8N5M9 183 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 METTL27Q8N6F8 245 aaPredicted RBP18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SP7Q8TDD2 431 aaPredicted RBP18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR2A5Q96R48 311 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 UTP23Q9BRU9 249 aaKnown RBP18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TEX101Q9BY14 249 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TMEM218A2RU14 115 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 C5orf51A6NDU8 294 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 POM121BA6NF01 834 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR4C45A6NMZ5 311 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms