RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, human

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-208	ENST00000564703		G3V2T6	193 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703		H3BN98	237 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	SLC2A10	O95528	541 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	TXNDC12	O95881	172 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	ZNF23	P17027	643 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	ARR3	P36575	388 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	SGCA	Q16586	387 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	NRN1L	Q496H8	165 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	C10orf128	Q5T292	105 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	SLC25A47	Q6Q0C1	308 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	ZNF627	Q7L945	461 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	DPPA2	Q7Z7J5	298 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	TEX47	Q8TBZ9	253 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	PYDC1	Q8WXC3	89 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	LRTOMT	Q8WZ04	291 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	RASD2	Q96D21	266 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	CENPN	Q96H22	339 aa	Predicted RBP	13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	RADIL	Q96JH8	1075 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	NIPSNAP1	Q9BPW8	284 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	TSSK6	Q9BXA6	273 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	RNF121	Q9H920	327 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	NTN4	Q9HB63	628 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	TMEM38B	Q9NVV0	291 aa		13.97	□□□□□ -0.17
RAB40C-208	ENST00000564703	CRYBG3	Q68DQ2	2970 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	SLC22A23	A1A5C7	686 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703		H7C1C5	153 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	SLC16A7	O60669	478 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	UBL3	O95164	117 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	CBR1	P16152	277 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	POU1F1	P28069	291 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	CRABP1	P29762	137 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	ZNF133	P52736	654 aa	Predicted RBP	13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	LCN6	P62502	163 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	TUBA1B	P68363	451 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	TUBA4A	P68366	448 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	MRPS34	P82930	218 aa	Known RBP	13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	FMOD	Q06828	376 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	PIGF	Q07326	219 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	BSPH1	Q075Z2	132 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	GSG1	Q2KHT4	349 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	SLC36A2	Q495M3	483 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	MEST	Q5EB52	335 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	SLC35F1	Q5T1Q4	408 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	DNM1P34	Q6PK57	102 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	TUBA1A	Q71U36	451 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	SLC16A14	Q7RTX9	510 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	HS3ST5	Q8IZT8	346 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	SVOPL	Q8N434	492 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	OR2T33	Q8NG76	320 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	DNAJC9	Q8WXX5	260 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	TEX12	Q9BXU0	123 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	SIAE	Q9HAT2	523 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703	RNF115	Q9Y4L5	304 aa		13.96	□□□□□ -0.17
RAB40C-208	ENST00000564703		A0A1W2PPL8	197 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	ABCD4	O14678	606 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SIAH2	O43255	324 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	KHDRBS3	O75525	346 aa	Known RBP	13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SOX14	O95416	240 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	HLA-H	P01893	362 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	CD40	P25942	277 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	CDKN2A	P42771	156 aa	Known RBP	13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	CENPA	P49450	140 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	KRTAP10-9	P60411	292 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	RAB1A	P62820	205 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	TMEM53	Q6P2H8	277 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	LEG1	Q6P5S2	330 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SLC22A25	Q6T423	547 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SKA3	Q8IX90	412 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	LRRC18	Q8N456	261 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	FAM169B	Q8N8A8	192 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	IL17RD	Q8NFM7	739 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	OR52E2	Q8NGJ4	325 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	OR4K13	Q8NH42	304 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	STMN2	Q93045	179 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	NMD3	Q96D46	503 aa	Known RBP	13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	LURAP1	Q96LR2	239 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SLC38A2	Q96QD8	506 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SH3GL3	Q99963	347 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SYT4	Q9H2B2	425 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SEMA6A	Q9H2E6	1030 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	NELFA	Q9H3P2	528 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	SRA1	Q9HD15	236 aa	Known RBP	13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	CCNB1IP1	Q9NPC3	277 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	NPAP1	Q9NZP6	1156 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	POU2F3	Q9UKI9	436 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	FBXL3	Q9UKT7	428 aa		13.95	□□□□□ -0.18
RAB40C-208	ENST00000564703	CELSR2	Q9HCU4	2923 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	RAB36	O95755	333 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	IFNG	P01579	166 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	CRYAA	P02489	173 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	OSM	P13725	252 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	HIST1H1C	P16403	213 aa	Known RBP	13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	CDA	P32320	146 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	PTDSS1	P48651	473 aa	Known RBP	13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	PLP2	Q04941	152 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	NPRL3	Q12980	569 aa		13.94	□□□□□ -0.18
RAB40C-208	ENST00000564703	C3orf36	Q3SXR2	165 aa		13.94	□□□□□ -0.18

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