RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ACOT7O00154 380 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 F10P00742 488 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 PRKAR1AP10644 381 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 PTGS2P35354 604 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 CD97P48960 835 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 ENTPD1P49961 510 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 GFRA1P56159 465 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 TP53I3Q53FA7 332 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 WIPI1Q5MNZ9 446 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF684Q5T5D7 378 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 HBMQ6B0K9 141 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 DMKNQ6E0U4 476 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-210ENST00000564587 VASNQ6EMK4 673 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 SLC18B1Q6NT16 456 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF544Q6NX49 715 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 SSX6Q7RTT6 188 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 SLC22A16Q86VW1 577 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 NOXO1Q8NFA2 376 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 MCFD2Q8NI22 146 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 PHYHIPQ92561 330 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 RELTQ969Z4 430 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 CPNE4Q96A23 557 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-210ENST00000564587 PELI1Q96FA3 418 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 TXNDC15Q96J42 360 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 TTTY12Q9BZ98 90 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 SLIRPQ9GZT3 109 aaKnown RBP13.89□□□□□ -0.19
COMMD4-210ENST00000564587 NXF2Q9GZY0 626 aaKnown RBP13.89□□□□□ -0.19
COMMD4-210ENST00000564587 MED29Q9NX70 200 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 KCNG2Q9UJ96 466 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 GNG8Q9UK08 70 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 COPS3Q9UNS2 423 aa13.89□□□□□ -0.19
COMMD4-210ENST00000564587 CNOT1A5YKK6 2376 aaKnown RBP13.89□□□□□ -0.19
COMMD4-210ENST00000564587 MED13Q9UHV7 2174 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 SLC35F4A4IF30 521 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 TVP23AA6NH52 213 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF593O00488 134 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-210ENST00000564587 GABRPO00591 440 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 EIF1AYO14602 144 aaKnown RBP13.88□□□□□ -0.19
COMMD4-210ENST00000564587 TNFSF11O14788 317 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 AQP8O94778 261 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 GLSO94925 669 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-210ENST00000564587 PGA4P0DJD7 388 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 PGA3P0DJD8 388 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 MEOX1P50221 254 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 RORCP51449 518 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 HCCSP53701 268 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 C19orf57Q0VDD7 668 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 CDK5R1Q15078 307 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 BCL2A1Q16548 175 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF766Q5HY98 468 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 ARL9Q6T311 187 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 IGFL2Q6UWQ7 119 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 GALNTL5Q7Z4T8 443 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 GLB1L2Q8IW92 636 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 ZFP41Q8N8Y5 198 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 ZFP62Q8NB50 900 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-210ENST00000564587 SYT14Q8NB59 555 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 TMEM203Q969S6 136 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 SMIM19Q96E16 107 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 TMED9Q9BVK6 235 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 ACKR4Q9NPB9 350 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 CRNNQ9UBG3 495 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-210ENST00000564587 ST6GALNAC2Q9UJ37 374 aa13.88□□□□□ -0.19
COMMD4-210ENST00000564587 COA3Q9Y2R0 106 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-210ENST00000564587 A0A075B6Q4 140 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 PNMA8CA0A1B0GUJ8 204 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 DCDC2BA2VCK2 349 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 ACTL6AO96019 429 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 CCL11P51671 97 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 ADAM8P78325 824 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 FABP5Q01469 135 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 PCK2Q16822 640 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 SOWAHCQ53LP3 525 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-210ENST00000564587 C22orf42Q6IC83 251 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 CREB3L2Q70SY1 520 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 TRILQ7L0X0 811 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 GGNQ86UU5 652 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 FAM109AQ8N4B1 249 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 MEIOBQ8N635 442 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 TMEM251Q8N6I4 163 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 YIPF7Q8N8F6 280 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 TEX19Q8NA77 164 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 SLC26A10Q8NG04 563 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 OR10H5Q8NGA6 315 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 OR9K2Q8NGE7 335 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 OR6Q1Q8NGQ2 317 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 SMAP2Q8WU79 429 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-210ENST00000564587 THEM6Q8WUY1 208 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 ADGRG7Q96K78 797 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 TM9SF2Q99805 663 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 WDR12Q9GZL7 423 aaKnown RBP13.87□□□□□ -0.19
COMMD4-210ENST00000564587 PLGRKTQ9HBL7 147 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 HMG20AQ9NP66 347 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 GALNT8Q9NY28 637 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 RCE1Q9Y256 329 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 PEX16Q9Y5Y5 336 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms