RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TIMM10BQ9Y5J6 103 aa2.39□□□□□ -2.03
UBR1-205ENST00000564540 A0A1B0GTQ1 180 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 M0QX08 132 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 AKR7A2O43488 359 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 CDH16O75309 829 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 CST1P01037 141 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 RALBP11234 206 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 ETS2P15036 469 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 PGAM1P18669 254 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 NPY1RP25929 384 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 HNRNPH3P31942 346 aaKnown RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 FDFT1P37268 417 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 MAP3K8P41279 467 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 ATP1B3P54709 279 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 CARD18P57730 90 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 RPS15P62841 145 aaKnown RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 HMGCS1Q01581 520 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 ACVR1Q04771 509 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 SPAG1Q07617 926 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 IL18Q14116 193 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 MESDQ14696 234 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 CARD16Q5EG05 197 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 XKR7Q5GH72 579 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 C1orf94Q6P1W5 598 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 RNASEKQ6P5S7 137 aaKnown RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 HSDL2Q6YN16 418 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 BZW1Q7L1Q6 419 aaKnown RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 MYOCDQ8IZQ8 938 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 PGAM4Q8N0Y7 254 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 FAM83FQ8NEG4 500 aaPredicted RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 SDR9C7Q8NEX9 313 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 ACTRT1Q8TDG2 376 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 ACOT11Q8WXI4 607 aaPredicted RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 MCUR1Q96AQ8 359 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 C10orf35Q96D05 121 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 COPS8Q99627 209 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 TRIM62Q9BVG3 475 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 RIOK2Q9BVS4 552 aaKnown RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 AZI2Q9H6S1 392 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 TMEM185BQ9H7F4 350 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 AUNIPQ9H7T9 357 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 IL26Q9NPH9 171 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 POLE4Q9NR33 117 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 THUMPD1Q9NXG2 353 aaKnown RBP2.38□□□□□ -2.03
UBR1-205ENST00000564540 SLC2A8Q9NY64 477 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 KCNIP1Q9NZI2 227 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 OR12D3Q9UGF7 316 aa2.38□□□□□ -2.03
UBR1-205ENST00000564540 CARMIL3Q8ND23 1372 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 LINC00854A0A1B0GVQ3 168 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 A0A1W2PPE3 182 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 SPECC1L-ADORA2AF8WAN1 911 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 NEMFO60524 1076 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 GAPDHP04406 335 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 ALDOBP05062 364 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 DCNP07585 359 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 TROVE2P10155 538 aaKnown RBP eCLIP2.37□□□□□ -2.03
UBR1-205ENST00000564540 ATP1B2P14415 290 aaPredicted RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 ZNF30P17039 623 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 TUBG1P23258 451 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 CMA1P23946 247 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 GCAP28676 217 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 DDOSTP39656 456 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 MAGEA1P43355 309 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 CDKN1BP46527 198 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 RPS5P46782 204 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 SLC11A1P49279 550 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 DUSP3P51452 185 aaPredicted RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 DMTNQ08495 405 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 BST2Q10589 180 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 DOC2AQ14183 400 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 GK3PQ14409 553 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 PIP5KL1Q5T9C9 394 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 AADACL4Q5VUY2 407 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 H2BFWTQ7Z2G1 175 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 TGIF2LXQ8IUE1 241 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 SLC35F2Q8IXU6 374 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 KATNAL2Q8IYT4 538 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 GTPBP8Q8N3Z3 284 aaPredicted RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 ARRDC1Q8N5I2 433 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 COMMD1Q8N668 190 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 OR2L3Q8NG85 312 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 OR1N2Q8NGR9 330 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 OR2G3Q8NGZ4 309 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 SYNPRQ8TBG9 265 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 ISG20Q96AZ6 181 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 ZNF707Q96C28 371 aaPredicted RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 C12orf42Q96LP6 360 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 REEP4Q9H6H4 257 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 GEMIN7Q9H840 131 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 NOX3Q9HBY0 568 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 ZNF160Q9HCG1 818 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 TUBG2Q9NRH3 451 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 GCNT4Q9P109 453 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 SLC7A8Q9UHI5 535 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 CFAP45Q9UL16 551 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 CSDC2Q9Y534 153 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 F11RQ9Y624 299 aaKnown RBP2.37□□□□□ -2.03
UBR1-205ENST00000564540 NPTNQ9Y639 398 aa2.37□□□□□ -2.03
UBR1-205ENST00000564540 PNPLA6Q8IY17 1366 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 PLEKHG2Q9H7P9 1386 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms