RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ACOT11Q8WXI4 607 aaPredicted RBP17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 NMD3Q96D46 503 aaKnown RBP17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 TNFRSF13CQ96RJ3 184 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 MRPL37Q9BZE1 423 aaKnown RBP17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 DYNLRB1Q9NP97 96 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 YAE1D1Q9NRH1 226 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 CMAHPQ9Y471 501 aa17.22■□□□□ 0.35
SHCBP1-203ENST00000564272 A0A087WUU8 490 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 GMNCA6NCL1 334 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 NPIPB13A6NJU9 1138 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 EFCAB9A8MZ26 197 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 NPIPB4C9JG80 1138 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 IGFBP1P08833 259 aaPredicted RBP17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 CDAP32320 146 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 GPR4P46093 362 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 GALK2Q01415 458 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 CD47Q08722 323 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 FHL1Q13642 323 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 FXNQ16595 210 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 TMEM53Q6P2H8 277 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 LRRC18Q8N456 261 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 PAQR4Q8N4S7 273 aaPredicted RBP17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 RNF148Q8N7C7 305 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 CLDN22Q8N7P3 220 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 LRRC75AQ8NAA5 344 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 NSMAFQ92636 917 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 MRPL24Q96A35 216 aaKnown RBP17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 TSPAN32Q96QS1 320 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 KCNK17Q96T54 332 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 SYT3Q9BQG1 590 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 PIMREGQ9BSJ6 248 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 RAB1BQ9H0U4 201 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 RNF121Q9H920 327 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 ADA2Q9NZK5 511 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 STX18Q9P2W9 335 aaKnown RBP17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 FZR1Q9UM11 496 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 SPEF1Q9Y4P9 236 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 UGT2A1Q9Y4X1 527 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 ENPP4Q9Y6X5 453 aa17.21■□□□□ 0.35
SHCBP1-203ENST00000564272 ANK3Q12955 4377 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 RTTNQ86VV8 2226 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 CHD3Q12873 2000 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 HTR3EA5X5Y0 456 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 VWC2LB2RUY7 222 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 TLX2O43763 284 aaPredicted RBP17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 IGHMP01871 453 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 ADRA2AP08913 450 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 CCL2P13500 99 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 USF1P22415 310 aaPredicted RBP17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 CTXN1P60606 82 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 RPL27P61353 136 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 SLC36A2Q495M3 483 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 NRN1LQ496H8 165 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 OAFQ86UD1 273 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 FAM86B1Q8N7N1 296 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 FAM156AQ8NDB6 213 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 SLC30A7Q8NEW0 376 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 TPK1Q9H3S4 243 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 SLC7A8Q9UHI5 535 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 RPS6KA6Q9UK32 745 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 ADAM21Q9UKJ8 722 aa17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 ZNF346Q9UL40 294 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-203ENST00000564272 YLPM1P49750 1951 aaKnown RBP17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 CDC42EP2O14613 210 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 CRLF1O75462 422 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 MMP7P09237 267 aaPredicted RBP17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 GLRXP35754 106 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 VLDLRP98155 873 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 GGTLC2Q14390 218 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 TAF11Q15544 211 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 GLYATQ6IB77 296 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 MBOAT2Q6ZWT7 520 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 DPPA2Q7Z7J5 298 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 LRP11Q86VZ4 500 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 CYP4Z1Q86W10 505 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 ZNF519Q8TB69 540 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 NABP1Q96AH0 204 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 FOXN4Q96NZ1 517 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 OR51B6Q9H340 312 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 NMNAT1Q9HAN9 279 aaPredicted RBP17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 SMURF2Q9HAU4 748 aa17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 MYOZ1Q9NP98 299 aaPredicted RBP17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 MYEF2Q9P2K5 600 aaKnown RBP17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 FBXO9Q9UK97 447 aaPredicted RBP17.19■□□□□ 0.34
SHCBP1-203ENST00000564272 NDUFS8O00217 210 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 FAM157BP0CG42 384 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 TCN1P20061 433 aaPredicted RBP17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 NR4A2P43354 598 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 RPS23P62266 143 aaKnown RBP17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 MRPS34P82930 218 aaKnown RBP17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 MAD2L1BPQ15013 274 aaPredicted RBP17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 C6orf52Q5T4I8 152 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 SLC25A47Q6Q0C1 308 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 RNF113BQ8IZP6 322 aaKnown RBP17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 SLC7A13Q8TCU3 470 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 ALG12Q9BV10 488 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 SIAEQ9HAT2 523 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 CDH20Q9HBT6 801 aa17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 DCAF13Q9NV06 445 aaKnown RBP17.18■□□□□ 0.34
SHCBP1-203ENST00000564272 NDUFAF4Q9P032 175 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms