RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 QDPRP09417 244 aa9□□□□□ -0.97
SMG1-208ENST00000563448 LIMS3P0CW19 117 aa9□□□□□ -0.97
SMG1-208ENST00000563448 LIMS4P0CW20 117 aa9□□□□□ -0.97
SMG1-208ENST00000563448 JUNBP17275 347 aaPredicted RBP9□□□□□ -0.97
SMG1-208ENST00000563448 NAA10P41227 235 aaPredicted RBP9□□□□□ -0.97
SMG1-208ENST00000563448 RPL5P46777 297 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 CSNK1A1P48729 337 aa9□□□□□ -0.97
SMG1-208ENST00000563448 CENPAP49450 140 aa9□□□□□ -0.97
SMG1-208ENST00000563448 NR1H2P55055 460 aa9□□□□□ -0.97
SMG1-208ENST00000563448 KLRB1Q12918 225 aa9□□□□□ -0.97
SMG1-208ENST00000563448 RNPS1Q15287 305 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 TBCEQ15813 527 aaPredicted RBP9□□□□□ -0.97
SMG1-208ENST00000563448 DNM1P34Q6PK57 102 aa9□□□□□ -0.97
SMG1-208ENST00000563448 LHFPL3Q86UP9 236 aa9□□□□□ -0.97
SMG1-208ENST00000563448 TIGD4Q8IY51 512 aa9□□□□□ -0.97
SMG1-208ENST00000563448 C20orf196Q8IYI0 205 aa9□□□□□ -0.97
SMG1-208ENST00000563448 NANOGP1Q8N7R0 232 aa9□□□□□ -0.97
SMG1-208ENST00000563448 POMGNT2Q8NAT1 580 aa9□□□□□ -0.97
SMG1-208ENST00000563448 NSMAFQ92636 917 aa9□□□□□ -0.97
SMG1-208ENST00000563448 CNN2Q99439 309 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 TBX5Q99593 518 aa9□□□□□ -0.97
SMG1-208ENST00000563448 SLX1AQ9BQ83 275 aa9□□□□□ -0.97
SMG1-208ENST00000563448 JAM3Q9BX67 310 aa9□□□□□ -0.97
SMG1-208ENST00000563448 MRPL22Q9NWU5 206 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 NOSIPQ9Y314 301 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 C12orf71A8MTZ7 269 aa9□□□□□ -0.97
SMG1-208ENST00000563448 AHRRA9YTQ3 701 aa9□□□□□ -0.97
SMG1-208ENST00000563448 PTHP01270 115 aa9□□□□□ -0.97
SMG1-208ENST00000563448 LCKP06239 509 aa9□□□□□ -0.97
SMG1-208ENST00000563448 YES1P07947 543 aa9□□□□□ -0.97
SMG1-208ENST00000563448 PSKH1P11801 424 aa9□□□□□ -0.97
SMG1-208ENST00000563448 EDNRAP25101 427 aa9□□□□□ -0.97
SMG1-208ENST00000563448 CD79BP40259 229 aa9□□□□□ -0.97
SMG1-208ENST00000563448 ZNF133P52736 654 aaPredicted RBP9□□□□□ -0.97
SMG1-208ENST00000563448 DOC2BQ14184 412 aa9□□□□□ -0.97
SMG1-208ENST00000563448 LY6DQ14210 128 aa9□□□□□ -0.97
SMG1-208ENST00000563448 OTPQ5XKR4 325 aa9□□□□□ -0.97
SMG1-208ENST00000563448 ZNF585AQ6P3V2 769 aa9□□□□□ -0.97
SMG1-208ENST00000563448 PCSK4Q6UW60 755 aa9□□□□□ -0.97
SMG1-208ENST00000563448 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 SLC35F2Q8IXU6 374 aa9□□□□□ -0.97
SMG1-208ENST00000563448 OR6N1Q8NGY5 312 aa9□□□□□ -0.97
SMG1-208ENST00000563448 FNDC8Q8TC99 324 aa9□□□□□ -0.97
SMG1-208ENST00000563448 TMIGD2Q96BF3 282 aa9□□□□□ -0.97
SMG1-208ENST00000563448 WDR76Q9H967 626 aa9□□□□□ -0.97
SMG1-208ENST00000563448 CALHM2Q9HA72 323 aa9□□□□□ -0.97
SMG1-208ENST00000563448 ASF1BQ9NVP2 202 aa9□□□□□ -0.97
SMG1-208ENST00000563448 ERVK13-1Q9NX77 482 aa9□□□□□ -0.97
SMG1-208ENST00000563448 EMC3Q9P0I2 261 aa9□□□□□ -0.97
SMG1-208ENST00000563448 EXOSC1Q9Y3B2 195 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 CACNA1CQ13936 2221 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 DPPA5A6NC42 116 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 SLC43A1O75387 559 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 UPK3AO75631 287 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 INMTO95050 263 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 MPZL1O95297 269 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 SCG5P05408 212 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 GAAP10253 952 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 FCGR2AP12318 317 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 ZNF85Q03923 595 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 MEP1BQ16820 701 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
SMG1-208ENST00000563448 C10orf128Q5T292 105 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 UBE2UQ5VVX9 321 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 SLC16A9Q7RTY1 509 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 P4HA3Q7Z4N8 544 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 SATL1Q86VE3 508 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 ERI1Q8IV48 349 aaKnown RBP8.99□□□□□ -0.97
SMG1-208ENST00000563448 MCEMP1Q8IX19 187 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 RFLNBQ8N5W9 214 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 ACBD7Q8N6N7 88 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 OR10H4Q8NGA5 316 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 MUL1Q969V5 352 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 INTS12Q96CB8 462 aaKnown RBP8.99□□□□□ -0.97
SMG1-208ENST00000563448 OR5M11Q96RB7 305 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 COPS3Q9UNS2 423 aa8.99□□□□□ -0.97
SMG1-208ENST00000563448 LSM2Q9Y333 95 aaKnown RBP8.99□□□□□ -0.97
SMG1-208ENST00000563448 A0A1W2PQL4 384 aaPredicted RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 DAPL1A0PJW8 107 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ZNF99A8MXY4 864 aaPredicted RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 MRPL33O75394 65 aaKnown RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 HLA-DQA2P01906 255 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 TPOP07202 933 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 OR2T7P0C7T2 308 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 MYL12AP19105 171 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 LAP3P28838 519 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 RPS27P42677 84 aaKnown RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 BLVRAP53004 296 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 GP2P55259 537 aaKnown RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 GLO1Q04760 184 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 RAB39AQ14964 217 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 OR2G6Q5TZ20 316 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 RTL6Q6ICC9 239 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 RPTNQ6XPR3 784 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 LINGO2Q7L985 606 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 SSX6Q7RTT6 188 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 NUFIP2Q7Z417 695 aaKnown RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 CD163Q86VB7 1156 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 CDC20BQ86Y33 519 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 PIAS4Q8N2W9 510 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms