RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 C2orf76Q3KRA6 126 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 C9orf50Q5SZB4 431 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 NKAIN2Q5VXU1 208 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 RGS7BPQ6MZT1 257 aaPredicted RBP11.83□□□□□ -0.52
USB1-207ENST00000563149 SLC18B1Q6NT16 456 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 KCTD18Q6PI47 426 aaPredicted RBP11.83□□□□□ -0.52
USB1-207ENST00000563149 TMUB2Q71RG4 321 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 PARGQ86W56 976 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 OR10AC1Q8NH08 325 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 CCDC107Q8WV48 283 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 FAM3DQ96BQ1 224 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 CCDC120Q96HB5 630 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 ELOVL3Q9HB03 270 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 LANCL2Q9NS86 450 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 ZNF107Q9UII5 783 aaPredicted RBP11.83□□□□□ -0.52
USB1-207ENST00000563149 TRAV18A0A075B6X5 111 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 A0A0A6YYH2 397 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 OR2W5A6NFC9 320 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 A6NJ64 397 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 TMEM150CB9EJG8 249 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 AQP8O94778 261 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PGCP20142 388 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PBX2P40425 430 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 RPL27P61353 136 aaKnown RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 TAGLNQ01995 201 aaKnown RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 SMUG1Q53HV7 270 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 GLT8D1Q68CQ7 371 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 CHMP1BQ7LBR1 199 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 GLRX5Q86SX6 157 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 TMEM151BQ8IW70 566 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PM20D2Q8IYS1 436 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 GPX8Q8TED1 209 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 HMGB4Q8WW32 186 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 METTL21AQ8WXB1 218 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 EDAQ92838 391 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 ADIPOR1Q96A54 375 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 WBP1Q96G27 269 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 KLHDC7BQ96G42 594 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 OR1F2PQ96R84 312 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 GAS2L1Q99501 681 aaPredicted RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 REG4Q9BYZ8 158 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PPA2Q9H2U2 334 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 SLCO5A1Q9H2Y9 848 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 C1orf198Q9H425 327 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 CDCP1Q9H5V8 836 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 SCPEP1Q9HB40 452 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 APMAPQ9HDC9 416 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PDE7BQ9NP56 450 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 MYOZ1Q9NP98 299 aaPredicted RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 VSX1Q9NZR4 365 aaPredicted RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 KCNG2Q9UJ96 466 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PRSS37A4D1T9 235 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 MEGF11A6BM72 1044 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 MFSD2BA6NFX1 497 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 EPOPA6NHQ4 379 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 H0YC42 278 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 SLC25A12O75746 678 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 OR6A2O95222 327 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PMS2P2O95744 297 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 WNT11O96014 354 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 IGHMP01871 453 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 HRGP04196 525 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 RLN1P04808 185 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 GABRA1P14867 456 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 FSTP19883 344 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 CCKBRP32239 447 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 MAZP56270 477 aaKnown RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 TAS2R19P59542 299 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 ZNF117Q03924 483 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 MEP1BQ16820 701 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 STEAP1BQ6NZ63 245 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 CLEC1AQ8NC01 280 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 OR51A4Q8NGJ6 313 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 OR52B4Q8NGK2 314 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 ZNF519Q8TB69 540 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 SLC25A21Q9BQT8 299 aaPredicted RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 LRRC61Q9BV99 259 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 SDHAF2Q9NX18 166 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 CLEC1BQ9P126 229 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
USB1-207ENST00000563149 TMEM184BQ9Y519 407 aaPredicted RBP11.82□□□□□ -0.52
USB1-207ENST00000563149 ALG1L2C9J202 215 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 KRBOX1C9JBD0 128 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 TO15178 435 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 IGKV3-11P04433 115 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 ITGB2P05107 769 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 CD2P06729 351 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 ITGA5P08648 1049 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 GP1BBP13224 206 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 MAP2K6P52564 334 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 RIDAP52758 137 aaKnown RBP11.81□□□□□ -0.52
USB1-207ENST00000563149 EFNB2P52799 333 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 ELOCQ15369 112 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 TSSK4Q6SA08 328 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 C5orf46Q6UWT4 87 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms